| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2021-08-03 | templates: edit_phenotype: Add file upload and "approval" buttons | BonfaceKilz | |
| 2021-08-03 | templates: edit_phenotype: Add enctype to form cause of file uploads | BonfaceKilz | |
| 2021-08-03 | wqflask: views: Return the json data for viewing | BonfaceKilz | |
| * wqflask/wqflask/views.py (display_file): New function. | |||
| 2021-08-03 | wqflask: views: Approve data when the "approve" button is clicked | BonfaceKilz | |
| * wqflask/wqflask/views.py (approve_data): New function. | |||
| 2021-08-03 | wqflask: views: Show diff files for the admin | BonfaceKilz | |
| * wqflask/wqflask/views.py (display_diffs_admin): New function. * wqflask/wqflask/templates/display_files.html: New template to show the diffs. | |||
| 2021-08-03 | wqflask: views: Process file_csv if provided and get the diff | BonfaceKilz | |
| * wqflask/wqflask/views.py (update_phenotype): If a file is provided in the request, get the diff and store it in a data escrow. | |||
| 2021-08-03 | wqflask: views: Remove un-necessary comment "#" sequence | BonfaceKilz | |
| 2021-08-03 | wqflask: views: Edit end-point to use the phenotype-id | BonfaceKilz | |
| squash! wqflask: views: Edit end-point to use the phenotype-id | |||
| 2021-08-03 | wqflask: views: Add endpoint for getting the csv data | BonfaceKilz | |
| 2021-07-23 | minor fixes for test_correlation_page table columns | Alexander Kabui | |
| 2021-07-23 | set compute_all for test_compute to True | Alexander Kabui | |
| 2021-07-23 | handle missing tissue input data | Alexander Kabui | |
| 2021-07-13 | Fixed corr_coeffient to corr_coefficient | zsloan | |
| 2021-07-12 | Encode user_id as bytestring if not already bytestring to account for some ↵ | zsloan | |
| user_ids being stored as different encoding | |||
| 2021-07-12 | fix merge conflict | Alexander Kabui | |
| 2021-07-12 | tests: test_markdown_routes: Remove stubbed out tests | BonfaceKilz | |
| 2021-07-12 | templates: show_trait_details: Show edit buttons conditionally | BonfaceKilz | |
| * wqflask/wqflask/templates/show_trait_details.html: Check the data type, and load different edit buttons. | |||
| 2021-07-12 | wqflask: views: Add route for updating the probeset | BonfaceKilz | |
| 2021-07-12 | templates: edit_probeset: Add template for editing probeset data | BonfaceKilz | |
| * wqflask/wqflask/templates/edit_probeset.html: New file(template). | |||
| 2021-07-12 | wqflask: views: Add extra route showing probeset editing form | BonfaceKilz | |
| * wqflask/wqflask/views.py (edit_probeset): New function/ route. | |||
| 2021-07-12 | wqflask: views: Rename endpoint for editing a trait | BonfaceKilz | |
| * wqflask/wqflask/views.py (edit_trait): Rename to edit_phenotype. Also rename the endpoint to "/trait/<name>/edit/inbredset-id/<inbred_set_id>" to indicate that and inbredset-id is required. This endpoint will be only used for phenotypes. Finally, render the "edit_phenotype.html" template (update_trait): Rename to update_phenotype. Also, remove hard-coded redirect, and replace it with the correct values. * wqflask/wqflask/templates/edit_trait.html: Rename to edit_phenotype.html | |||
| 2021-07-09 | Merge branch 'testing' into feature/use_gn3_for_correlations | zsloan | |
| 2021-07-09 | Remove commented out function do_bicor | zsloan | |
| 2021-07-09 | Only show literature and tissue correlation options if the trait's dataset ↵ | zsloan | |
| is type ProbeSet | |||
| 2021-07-09 | Changed compute_corr_for_top_results to also do sample correlation when ↵ | zsloan | |
| literature or tissue correlation are selected | |||
| 2021-07-06 | replace rpy2 for tissue corr | Alexander Kabui | |
| 2021-07-06 | fix gn2 links | Alexander Kabui | |
| 2021-07-03 | Increased width of mapping options div and covariates window | zsloan | |
| 2021-07-01 | Fixed issue with suggestive/significant lines extending beyond figure edge + ↵ | zsloan | |
| fixed a couple issues with the last commit | |||
| 2021-07-01 | Fixed issue where the interval map QTL line might extend beyond the graph ↵ | zsloan | |
| edge when zoomed into a Mb range + removed some commented out code | |||
| 2021-07-01 | Fixed issue where zooming into chromosome 1 was causing the Y axis scaling ↵ | zsloan | |
| to be bad | |||
| 2021-07-01 | Fixed bug where there'd be an error if the max boot count is 0 for a chromosome | zsloan | |
| 2021-06-21 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2021-06-18 | Changed limit from 2000 markers to 10000 markers for the number to show in ↵ | zsloan | |
| mapping results table | |||
| 2021-06-18 | Added Scroller to mapping results table | zsloan | |
| 2021-06-18 | Re-enable bicor as an option in the trait page templatee | zsloan | |
| 2021-06-18 | Reenable PCA for correlation matrix | zsloan | |
| 2021-06-18 | Re-enable bicor for correlations and fix issue where ro.Vector needed to be ↵ | zsloan | |
| changed to ro.FloatVector | |||
| 2021-06-17 | The listserv link was marked as broken but is working, so I made it a link ↵ | zsloan | |
| again, but the IRC channel link is broken so I marked it as broken | |||
| 2021-06-17 | UCSC Genome Browser link was marked as a broken link, but it apparently ↵ | zsloan | |
| works now so I added it back as a link | |||
| 2021-06-17 | Only show all-numerical attributes in the 'Filter samples by value' drop-down | zsloan | |
| 2021-06-17 | Added function for getting list of attributes with all numerical values ↵ | zsloan | |
| (that can be used with the 'Filter by value' feature) | |||
| 2021-06-17 | Fixed issue that caused filtering by attribute values to not work if ↵ | zsloan | |
| attribute values didn't exist for some samples | |||
| 2021-06-17 | delete loggers and comments | Alexander Kabui | |
| 2021-06-17 | add f1list and parlist to primary_samples | Alexander Kabui | |
| 2021-06-17 | minor refactoring | Alexander Kabui | |
| 2021-06-17 | sort sample name by sample_ids | Alexander Kabui | |
| 2021-06-17 | remove print statements | Alexander Kabui | |
| 2021-06-17 | remove unused functions + minor fixes | Alexander Kabui | |
| 2021-06-17 | minor fix | Alexander Kabui | |
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
| aboutsummaryrefslogtreecommitdiff |