| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2021-04-29 | Merge branch 'testing' into bug/network_graph_fixes | zsloan | |
| 2021-04-29 | Fix corr_scatter_plot url to include method - without method it was throwing ↵ | zsloan | |
| an error | |||
| 2021-04-29 | Don't draw edges between a trait and itself | zsloan | |
| 2021-04-29 | Changed the way sample data is fetched for network graph to include parents/f1s | zsloan | |
| 2021-04-29 | Merge branch 'testing' into Feature/Add-upload-data-forms | BonfaceKilz | |
| 2021-04-29 | Run `sed -i 's/(object)//g'` | BonfaceKilz | |
| See: https://is.gd/pL7IJF Ran: find . \( -type d -name .git -prune \) -o -type f -print0 | xargs -0 sed -i 's/(object)//g' | |||
| 2021-04-29 | base: trait: Remove unused function | BonfaceKilz | |
| * wqflask/base/trait.py (jsonable_table_row): Delete it. | |||
| 2021-04-29 | base: data_set: Remove unused method | BonfaceKilz | |
| * wqflask/base/data_set.py (Dataset.get_accession_id): Delete it. | |||
| 2021-04-29 | base: data_set: Apply pep-8 | BonfaceKilz | |
| 2021-04-29 | base: data_set: Remove unused method | BonfaceKilz | |
| * wqflask/base/data_set.py (riset): Delete class method. | |||
| 2021-04-29 | base: data_set: Rewrite data_set using @dataclass | BonfaceKilz | |
| @dataclasses should be used to hold only data. Since dataset only encapsulates data, re-writing it using a dataclass makes it more readable and easier to follow. | |||
| 2021-04-29 | tests: test_data_set: Update test | BonfaceKilz | |
| 2021-04-29 | tests: unit: test_data_set: Remove unused mock | BonfaceKilz | |
| 2021-04-29 | wqflask: show_trait: Autopep-8 buffer | BonfaceKilz | |
| 2021-04-29 | wqflask: show_trait: Remove unused imports. | BonfaceKilz | |
| * wqflask/wqflask/show_trait/show_trait.py: Delete unused imports. | |||
| 2021-04-29 | wqflask: Add new js file for processing menu entries | BonfaceKilz | |
| * wqflask/wqflask/static/new/javascript/dataset_select_menu_edit_trait.js: New file. Copy of dataset_select_menu_orig.js that will later modified... * wqflask/wqflask/templates/edit_trait.html: Use :point_up:. | |||
| 2021-04-29 | templates: edit_trait.html: Trim form to only contain selection menu | BonfaceKilz | |
| 2021-04-29 | templates: edit_trait.html: Add extra fields for the form | BonfaceKilz | |
| Add form elements for selecting group, type, and dataset. This mimics the home page. | |||
| 2021-04-29 | templates: edit_trait.html: Add comment headers | BonfaceKilz | |
| The comment headers mark different sections. | |||
| 2021-04-29 | wqflask: views: Add new function for selecting a dataset | BonfaceKilz | |
| * wqflask/wqflask/views.py(edit_trait_page): New function. | |||
| 2021-04-29 | templates: edit_trait.html: New file | BonfaceKilz | |
| Copy of submit_trait.html. This is a copy; that'll form the basis of the new edit page. | |||
| 2021-04-29 | wqflask: views: Replace dict de-structuring with kw arguments | BonfaceKilz | |
| * wqflask/wqflask/views.py (submit_trait_form): Use kw arguments when passing variables to the template. This is more readable. | |||
| 2021-04-28 | Merge pull request #568 from zsloan/bug/fix_gemma_temptrait_covariates | zsloan | |
| Fix the way temp traits are displayed when selecting covariates from a collection | |||
| 2021-04-28 | Added something to jsonable in trait.py to account for temp traits (this is ↵ | zsloan | |
| necessary for them to show up correctly when selecting traits from collections in pop-up windows, like when selecting cofactors for mapping) | |||
| 2021-04-28 | Merge pull request #567 from zsloan/bug/fix_gemma_temptrait_covariates | zsloan | |
| Account for temp traits when adding covariates with GEMMA mapping | |||
| 2021-04-28 | Account for temp traits when adding covariates with GEMMA mapping | zsloan | |
| 2021-04-28 | wqflask: views: Delete stale comments | BonfaceKilz | |
| 2021-04-28 | wqflask: views: Apply pep-8 | BonfaceKilz | |
| 2021-04-28 | Use right block level comments | BonfaceKilz | |
| 2021-04-28 | Remove stale comments | BonfaceKilz | |
| 2021-04-28 | Remove local variables that are unused | BonfaceKilz | |
| 2021-04-28 | wqflask: views: Remove news import | BonfaceKilz | |
| This name clashes with "def news" which is defined later. | |||
| 2021-04-28 | wqflask: views.py: Clean up imports section | BonfaceKilz | |
| Remove unused imports and break up long imports into shorter lines. | |||
| 2021-04-27 | templates: submit_trait.html: Add field for inputting trait name | BonfaceKilz | |
| 2021-04-23 | Remove stale comments | BonfaceKilz | |
| 2021-04-23 | Apply PEP-8 | BonfaceKilz | |
| 2021-04-23 | Rewrite For Loop in a more Pythonic way | BonfaceKilz | |
| 2021-04-23 | Rename index_page_orig to index_page | BonfaceKilz | |
| 2021-04-23 | Add full link to genetic data collected as part of WebQTL project | BonfaceKilz | |
| 2021-04-23 | Move looped sql query into one statement in "get_species_groups" | BonfaceKilz | |
| It's in-efficient to have a sql query executed in a loop. As data grows, the query becomes slower. It's better to let sql handle such queries. | |||
| 2021-04-23 | Remove stale comments | BonfaceKilz | |
| 2021-04-22 | Account for situations where the trait symbol is null for ProbeSet traits; ↵ | zsloan | |
| previously it could throw an error | |||
| 2021-04-22 | Added JS that sets the 'add to collection' dropdown to default to the ↵ | zsloan | |
| collection the use set as their default collection | |||
| 2021-04-19 | Specify only getting the first two items after splitting the trait/dataset ↵ | zsloan | |
| input string | |||
| 2021-04-19 | Removedu nused function from network_graph.py | zsloan | |
| 2021-04-19 | Removed commented out js file | zsloan | |
| 2021-04-19 | Fixed NIAAA link because apparently it was changed | zsloan | |
| 2021-04-19 | Removed unused code | zsloan | |
| 2021-04-14 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2021-04-14 | Added JS that automatically selects the default collection if it's set | zsloan | |
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
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