| Age | Commit message (Expand) | Author |
|---|
| 2021-05-28 | Added comment clarifying the situation with views.py imports | zsloan |
| 2021-05-28 | Re-added collect import in views.py since it was removed before (I'm guessing... | zsloan |
| 2021-05-27 | Merge pull request #579 from zsloan/feature/rqtl_with_gn3•••Use GN3 API for R/qtl | zsloan |
| 2021-05-27 | Fix the way Mock is initialized | zsloan |
| 2021-05-27 | Change test_rqtl_mapping.py to account for full results being returned from t... | zsloan |
| 2021-05-27 | Fixed way MockGroup was initialized | zsloan |
| 2021-05-27 | Forgot to import dataclass | zsloan |
| 2021-05-27 | Fixed syntax mistake when creating dataclass in test_rqtl_mapping.py | zsloan |
| 2021-05-27 | Removed parts of test_rqtl_mapping.py referring to process_perm_results and p... | zsloan |
| 2021-05-27 | Updated test_run_mapping.py to account for attribute keys being checked as lo... | zsloan |
| 2021-05-27 | Improved test_rqtl_mapping.py with Bonface's recommendation of uses dataclasses | zsloan |
| 2021-05-27 | Make all attribute names lowercase to deal with situations where sometimes th... | zsloan |
| 2021-05-27 | Add code writing perm_strata to phenotype input file in rqtl_mapping.py + fix... | zsloan |
| 2021-05-26 | wqflask: views: Update comment when data is edited•••For now the exact column that's edited isn't tracked.
| BonfaceKilz |
| 2021-05-26 | wqflask: views: Import "fetchone" & "update" from "gn3.db" | BonfaceKilz |
| 2021-05-26 | Use @admin_login_required to only enable Rob to do edits to traits•••* wqflask/wqflask/decorators.py (admin_login_required): New decorator.
* wqflask/wqflask/views.py (edit_trait): Use admin_login_required
decorator.
| BonfaceKilz |
| 2021-05-26 | wqflask: views: Add method that updates the trait•••* wqflask/wqflask/views.py (update_trait): New function.
| BonfaceKilz |
| 2021-05-26 | templates: edit_trait: Submit publish_xref data | BonfaceKilz |
| 2021-05-26 | wqflask: views: Remove unused imports | BonfaceKilz |
| 2021-05-26 | wqflask: views: Make imports top-level | BonfaceKilz |
| 2021-05-26 | templates: edit_trait: Make form functional(add ability to submit) | BonfaceKilz |
| 2021-05-26 | wqflask: views: Add edit_trait page•••Should add some some authentication logic to this later since it's not
supposed to be accessible to everyone.
| BonfaceKilz |
| 2021-05-26 | templates: edit_trait: Update edit btn to point to editing endpoint | BonfaceKilz |
| 2021-05-26 | wqflask: views: Add extra endpoint to display individual trait edit•••* wqflask/wqflask/views.py (show_edit_trait_page): New function/
end-point.
| BonfaceKilz |
| 2021-05-26 | templates: show_trait_details: Add an "[edit]" button | BonfaceKilz |
| 2021-05-26 | tests: test_gen_menu: Remove get_species | BonfaceKilz |
| 2021-05-26 | api: gen_menu: Replace get_species with get_all_species from gn3•••* wqflask/wqflask/api/gen_menu.py (gen_dropdown_json): Use new
`get_all_species` function.
(get_species): Remove it.
| BonfaceKilz |
| 2021-05-26 | db: webqtlDatabaseFunction: Remove comment | BonfaceKilz |
| 2021-05-26 | db: webqtlDatabaseFunction: Remove logger info | BonfaceKilz |
| 2021-05-26 | wqflask: database: Replace one-line function with it's body•••* wqflask/wqflask/database.py (init_db): Remove it.
| BonfaceKilz |
| 2021-05-26 | templates: edit_trait: Add form for editing a dataset (WIP) | BonfaceKilz |
| 2021-05-25 | Fixed/shortened get_categorical_variables function and correctly pass them to... | zsloan |
| 2021-05-25 | Removed code that processes output files, since this functionality is moved t... | zsloan |
| 2021-05-22 | Fixed the mocked return_value for requests.post to fix broken test | zsloan |
| 2021-05-22 | Fixed a couple broken tests | zsloan |
| 2021-05-22 | Rewrote test_rqtl_mapping.py, though haven't done tests for all functions yet | zsloan |
| 2021-05-21 | Removed a couple unused parameters for run_rqtl | zsloan |
| 2021-05-21 | run_rqtl now reads in permutation output | zsloan |
| 2021-05-20 | Re-implemented R/qtl to get the results from the GN3 API | zsloan |
| 2021-05-18 | Last commit failed to correctly change Y-axis position; this should fix that | zsloan |
| 2021-05-18 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan |
| 2021-05-18 | Fixed issue that caused the sample values in the Haplotype Analyst to be off ... | zsloan |
| 2021-05-17 | handle None for tissue input data | Alexander Kabui |
| 2021-05-14 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan |
| 2021-05-14 | Changed logic in SampleList to set num_cases_exists to False if all existing ... | zsloan |
| 2021-05-14 | Changed logic in has_num_cases to ignore N=1 | zsloan |
| 2021-05-13 | pep8 formatting & delete comments | Alexander Kabui |
| 2021-05-13 | integrate comute corr for top results in ui | Alexander Kabui |
| 2021-05-13 | add dataset and trait-name in ui template | Alexander Kabui |
| 2021-05-13 | Fix load_phenotypes to run with GN2 latest | Arthur Centeno |
