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blatseq_fix
chores/code-refactoring
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Author
2015-03-11
& Added testing option, now the results match
Pjotr Prins
2015-03-10
Normalisation
Pjotr Prins
2015-03-10
lmm.py: debugging output
Pjotr Prins
2015-03-10
Missing genotypes and normalize
Pjotr Prins
2015-03-10
Populationg Redis from TSV data
Pjotr Prins
2015-03-10
Refactored tsvreader out
Pjotr Prins
2015-03-10
Factoring out tsvreaders
Pjotr Prins
2015-03-10
convertlmm.py: add SNP names
Pjotr Prins
2015-03-10
Turn HAB encoding into pylmm genotyping
Pjotr Prins
2015-03-09
Add HAB encoding
Pjotr Prins
2015-03-09
Write genotype file non-transposed
Pjotr Prins
2015-03-09
Write genotype file (start)
Pjotr Prins
2015-03-09
Write genotype file (start)
Pjotr Prins
2015-03-09
plink: missing values in bim
Pjotr Prins
2015-03-09
Now we can use print in lamdba
Pjotr Prins
2015-03-09
Not using numpy - is part of the caller
Pjotr Prins
2015-03-09
plink: no need to know the number of SNPs, but you need INDs
Pjotr Prins
2015-03-09
plink support
Pjotr Prins
2015-03-09
convertlmm.py: options.geno
Pjotr Prins
2015-03-09
convertlmm.py: plink support
Pjotr Prins
2015-03-09
Parse new phenotype format
Pjotr Prins
2015-03-09
Parse new phenotype format
Pjotr Prins
2015-03-07
Write phenotypes
Pjotr Prins
2015-03-07
Kinship converter
Pjotr Prins
2015-03-05
Kinship file format support (reader and writer)
Pjotr Prins
2015-03-05
Convert textual kinship file
Pjotr Prins
2015-03-05
Helpers to split out functionality
Pjotr Prins
2015-03-05
Removed execution flag x from files
Pjotr Prins
2015-03-03
fix print
Pjotr Prins
2015-03-01
Warning
Pjotr Prins
2015-03-01
Add warning to running lmm.py from the command line
Pjotr Prins
2015-02-28
Started adaptations for introducing multi-core version
Pjotr Prins
2015-02-20
Splitting out handlers
Pjotr Prins
2015-02-20
Moved pylmm scripts that are not used by GN2
Pjotr Prins
2015-02-20
Remove empty dir
Pjotr Prins
2015-02-20
Split out behaviour for calling lmm from GN2 or (testing) CLI
Pjotr Prins
2015-02-11
Added pop-up for empty searches
Zachary Sloan
2015-01-30
Fixed several bugs
Zachary Sloan
2014-12-29
Made a bunch of cosmetic changes to various pages and fixed a couple searches
Zachary Sloan
2014-12-12
Added a additive effect column to search result and collection tables
Zachary Sloan
2014-12-11
Fixed some weirdness with the navbar and jumbotron and aligned everything
Zachary Sloan
2014-12-04
Added some pages for anonymous collections
Zachary Sloan
2014-12-04
Committing changes to css that change header color
Zachary Sloan
2014-12-01
Merge /home/lei/gene
Zachary Sloan
2014-12-01
Changed header appearances
Zachary Sloan
2014-12-01
Committer: Lei Yan <lei@penguin.uthsc.edu>
Lei Yan
2014-11-17
Just more changes converting to bootstrap 3
Zachary Sloan
2014-11-06
Upgraded to bootstrap 3 and updated a lot of html to reflect this
Zachary Sloan
2014-11-05
Committer: Lei Yan <lei@penguin.uthsc.edu>
Lei Yan
2014-11-04
Committer: Lei Yan <lei@penguin.uthsc.edu>
Lei Yan
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