genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Collapse)	Author
2020-05-06	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	zsloan

2020-05-06	Commiting a few minor changes plus returning rqtl_mapping.py to the same as ↵	zsloan
	on testing branch before merging Danny's changes and testing them
2020-05-06	Disable saving of RData	Danny Arends

2020-05-06	Fix the covariate, added debug, more output to track what it is doing	Danny Arends

2020-05-04	Committing some changes for testing covariates	zsloan

2020-05-04	Working on covariate mapping, making sure the addcovars are numeric	Danny Arends

2020-05-01	Aesthetic table changes to view collection and correlation result pagesproduction	zsloan

2020-04-30	Fixed the way it gets the N displayed on the loading page	zsloan

2020-04-29	Changed a lot about how mapping scale is read and gave the option to change ↵	zsloan
	mapping scale when both scales are available
2020-04-29	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	zsloan

2020-04-29	Fixed issue with global search when description field is empty	zsloan

2020-04-29	Adding some debug, so we have some info in the output	Danny Arends

2020-04-29	Fixing loading of the ITP data as a 4way cross, worked on ↵	Danny Arends
	http://gn2-test3.genenetwork.org/
2020-04-28	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	zsloan

2020-04-28	Added some metadata to the trait export	zsloan

2020-04-28	Remove old menu file	Pjotr Prins

2020-04-28	Merge with conflicts	Pjotr Prins

2020-04-28	Track requests and check for attribute so at least we get the right error:penguin2	Pjotr Prins
	GeneNetwork penguin2:genenetwork2:2.11-rc2-penguin2-0bca65695 http://gn2-test3.genenetwork.org/ ( 1:31PM UTC Apr 28, 2020) MISCONF Redis is configured to save RDB snapshots, but is currently not able to persist on disk. Commands that may modify the data set are disabled. Please check Redis logs for details about the error. (error) File "/home/wrk/opt/genenetwork2/lib/python2.7/site-packages/redis/connection.py", line 717, in read_response
2020-04-28	menu	Pjotr Prins

2020-04-27	Added timeout for when/if it does the REST API query, so it doesn't hang ↵	zsloan
	indefinitely
2020-04-27	Made change that should allow dataset structure to be loaded from Redis ↵	zsloan
	instead of the JSON file without breaking things
2020-04-26	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	Pjotr Prins

2020-04-26	Updated menu	Pjotr Prins

2020-04-26	Merge master and testingmaster	Pjotr Prins

2020-04-26	Removed the code that was still writing the database menu JSON	zsloan

2020-04-24	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	zsloan

2020-04-24	Replaced hard-coded instances of GN2 urls with ones pulled from settings file	zsloan

2020-04-24	Merge pull request #381 from acenteno/testing	zsloan
	Add colleagues - credits link
2020-04-24	Made a fix that should prevent the issue where new datasets cause an error ↵	zsloan
	when they're in search results
2020-04-23	Changed Trait to Marker for the stats table when the trait is a genotype trait	zsloan

2020-04-23	Fixed issue where covariates weren't being passed when zooming in or remapping	zsloan
	Added loading paage for zooming/remapping Added temporary option for checking mapping scale in .geno files
2020-04-23	Removed a line that was excluding Macaque from the drop-downs (and thus from ↵	zsloan
	the JSON file causing an error in the global search)
2020-04-22	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	zsloan

2020-04-22	Fixed a variety of issues related to users registering and logging in	zsloan
	GN2 should now work when Redis is empty
2020-04-21	Update base.html	acenteno
	At the end of this text in the footer, it should read ....Jintao Wang, Robert W. Williams, and colleagues. We need to add Saunak Sen in the list right by Pjotr Prins. The link at the end to "colleagues" is broken.
2020-04-21	Update views.py	acenteno
	Add credits link
2020-04-21	Create credits.html	acenteno
	Colleagues credit page
2020-04-21	Update base.html	acenteno
	Fix footer colleagues link to credits
2020-04-21	Update tutorials.html	acenteno
	Updated to v7
2020-04-21	Update base.html	acenteno
	Change position to tutorials link
2020-04-21	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	zsloan

2020-04-21	Update tutorials.html	acenteno
	Fix the title header
2020-04-21	Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing	zsloan

2020-04-21	Create tutorials.html	acenteno
	Link to the actual power point presentation
2020-04-21	Update views.py	acenteno
	Add tutorials link under News
2020-04-21	Update base.html	acenteno

2020-04-17	Added text for Range search to the search result page	zsloan

2020-04-16	Fixed issue that caused submitted traits to not open properly when submitted ↵	zsloan
	to a group with case attributes + fixed a link to GN1
2020-04-16	Changed and re-ordered tools on View Collection page in the same way as the ↵	zsloan
	search result and correlation pages
2020-04-16	Many changes, including:	zsloan
	- Added permutation strata option for R/qtl - Made a variety of aesthetic changes to collections-related pages - Made a variety of aesthetic changes to the multi-trait tool options on the search result and correlation pages - Made some functional changes to collections that prevent duplicate traits and ensure new traits are at the top - The "Default Collection" is now always at the bottom of the collection list and renamed to "Your Default Collection"