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AgeCommit message (Expand)Author
2013-02-21Add my_pylmm packageZachary Sloan
2013-02-21Plot points and chromosome lines are now correctZachary Sloan
2013-02-20Did more work with manhattan plot, trying to fix a small issueZachary Sloan
2013-02-20Created y-axisZachary Sloan
2013-02-19Manhattan plot and chromosome lines are all correct nowZachary Sloan
2013-02-19Made lines for manhattan plot proportional to chromosome lengthsZachary Sloan
2013-02-15Points are labeled with marker names and hovering causes the LRSZachary Sloan
2013-02-15Made it to where hovering over a point in the manhattan plot changesZachary Sloan
2013-02-15Created lines in marker regression scatter plot separatingZachary Sloan
2013-02-14Put coffeescript code for manhattan plot into a class/functionsZachary Sloan
2013-02-14Have marker regression results displaying as a scatterplot (just the points)Zachary Sloan
2013-02-13Got results displaying for BXD and fixed genofile_parser.py to workZachary Sloan
2013-02-13Got results for marker regression page displaying in tableZachary Sloan
2013-02-13Fixed some bugs related to getting the marker regression page workingZachary Sloan
2013-02-12Edited marker_regression.py and data_set.py to store the p-valuesZachary Sloan
2013-02-08Converted .geno files to json files and wrote code in marker_regression.pyZachary Sloan
2013-02-07Added code to marker_regression.py that creates the numpy arrays toZachary Sloan
2013-02-06Edited genofile_parser.py to go through all genofiles and convertZachary Sloan
2013-02-06Added changes to example.py and prep_data.py that lets nick's code read inZachary Sloan
2013-02-06Small change to search_results.py to get search results page to workZachary Sloan
2013-01-31Added wqflask-nginx.confZachary Sloan
2013-01-31Copied over nginx.conf from /etc/nginxZachary Sloan
2013-01-31Merge branch 'flask' of https://github.com/zsloan/genenetwork into flaskZachary Sloan
2013-01-31Changed reference to 'dataset_name' in keywords to 'dataset' to getZachary Sloan
2013-01-31Changed fd to kw in search_results.py, commented out some linesZachary Sloan
2013-01-25Fixed a few bugs while trying to get the code running on the new serverZachary Sloan
2013-01-22Pushed through a few errors in getting the correlation page runningZachary Sloan
2013-01-18Renamed CorrelationPage.py to show_corr_results.pyZachary Sloan
2013-01-11Commented out import of rpy2 in correlationFunction.py due toZachary Sloan
2013-01-11Upgraded packages requirements.txt but haven't testedZachary Sloan
2013-01-11Overwrote requirements.txtZachary Sloan
2013-01-11Trimmed a bunch of code off of marker_regression.pyZachary Sloan
2013-01-10Checking in before we try to write our own code for the manhattanZachary Sloan
2013-01-10Checking in before trying to put manhattan plot sections closer togetherZachary Sloan
2013-01-10Normalized the y axis for each manhattan plot sectionZachary Sloan
2013-01-10The plots now correctly appear above/below each other.Zachary Sloan
2013-01-10Edited marker_regression.coffee to make every sub-manhattan plotZachary Sloan
2013-01-10Made Chromosome class in marker_regression.coffee; currentZachary Sloan
2013-01-10Made x-axis values into ints; committing before trying to add multiple graphsZachary Sloan
2013-01-10Worked with the manhattan plot coffeescript to set x-axis and changeZachary Sloan
2013-01-09Manhattan plot results are appearing correctly for chromosome 1Zachary Sloan
2013-01-09The histogram coffeescript is now in its own class and the graphZachary Sloan
2013-01-09Checking in before putting the histogram coffeescript into its ownZachary Sloan
2013-01-09More or less finished the permutation histogramZachary Sloan
2013-01-09Got the permutation plot working as a line plot; still need to makeZachary Sloan
2013-01-09jqplot addedZachary Sloan
2013-01-09Got the marker regression page to display againZachary Sloan
2013-01-08js_data is being printed out (seemingly) correctly now for theZachary Sloan
2013-01-08Created IndChromosome class in species.py and wrote functions forZachary Sloan
2013-01-08Deleted some unnecessary code in marker_regression.py and fixed some bugsZachary Sloan
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