Age | Commit message (Expand) | Author |
2021-05-05 | Added a number of new metadata items to the mapping loading page, such as cov... | zsloan |
2021-05-05 | Added mapping download button above the results table | zsloan |
2021-05-05 | Made change that should cause clicking the R/qtl tab to make it compute; also... | zsloan |
2021-05-05 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan |
2021-05-05 | Removed broken Genome Browser link from index page | zsloan |
2021-05-05 | base: species: Remove redundant assignment | BonfaceKilz |
2021-05-05 | api: gen_menu: Remove "+" when concatenating strings inside brackets | BonfaceKilz |
2021-05-05 | tests: test_species: Update failing tests | BonfaceKilz |
2021-05-05 | base: chromosomes: Fetch the chromosomes lazily | BonfaceKilz |
2021-05-05 | base: species: Rewrite Chromosomes using a dataclass | BonfaceKilz |
2021-05-05 | base: species: Rewrite IndChromosome using a dataclass | BonfaceKilz |
2021-05-05 | base: trait: Remove logging information...The log adds unnecessary noise in addition to creating unwanted
side-effects.
| BonfaceKilz |
2021-05-05 | base: species: Rewrite TheSpecies class using a dataclass | BonfaceKilz |
2021-05-05 | base: species: Remove unused import | BonfaceKilz |
2021-05-05 | base: species: Format SQL queries | BonfaceKilz |
2021-05-05 | templates: test_species: Add tests for instantiating Chromosomes | BonfaceKilz |
2021-05-05 | tests: test_species: Test that IndChromosome instantiates correctly | BonfaceKilz |
2021-05-05 | tests: test_species: Add test cases for TestTheSpecies class | BonfaceKilz |
2021-05-04 | Removed unused rpy import in run_mapping.py | zsloan |
2021-05-03 | Account for the possibility of the R being returned as 0.999... by scipy when... | zsloan |
2021-04-30 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan |
2021-04-30 | Fixed issue where Network Graph wouldn't show edges if multiple nodes had the... | zsloan |
2021-04-30 | autopep8: Run autopep8 100 times with target rules...Rules used are:
E20,E211,E22,E224,E224,E225,E226,E227,E228,E231,E241,E242,
E251,E252,E26,E265,E266,E27,E301,E302,E303,E304,E305,E306,
E401,E501,E70,E701,W291,W292,W293,W391,W504,E101,E11,E121,
E122,E123,E124,E125,E126,E127,E128,E129,E131,E133
| BonfaceKilz |
2021-04-30 | autopep8: Fix E121,E122,E123,EI24,E125,E126,E127,E128,E129,E131,E133 | BonfaceKilz |
2021-04-30 | autopep8: Fix E101, E11 | BonfaceKilz |
2021-04-30 | autopep8: Fix W504 | BonfaceKilz |
2021-04-30 | autopep8: Fix W291, W292, W293, W391 | BonfaceKilz |
2021-04-30 | autopep8: Fix E70 and E701 | BonfaceKilz |
2021-04-30 | autopep8: Fix E501 | BonfaceKilz |
2021-04-30 | autopep8: Fix E401 | BonfaceKilz |
2021-04-30 | autopep8: Fix E301,E302,E303,E304,E305,E306 | BonfaceKilz |
2021-04-30 | autopep8: Fix E20-E27...Run:
python -m autopep8 --in-place --recrusive ./ --select\
E20,E211,E22,E224,E224,E225,E226,E227,E228,E231,E241,\
E242,E251,E252,E26,E265,E266,E27 -p 3
| BonfaceKilz |
2021-04-29 | I think the import of collect.py got removed with recent changes, so I'm addi... | zsloan |
2021-04-29 | Merge branch 'testing' into bug/network_graph_fixes | zsloan |
2021-04-29 | Fix corr_scatter_plot url to include method - without method it was throwing ... | zsloan |
2021-04-29 | Don't draw edges between a trait and itself | zsloan |
2021-04-29 | Changed the way sample data is fetched for network graph to include parents/f1s | zsloan |
2021-04-29 | Merge branch 'testing' into Feature/Add-upload-data-forms | BonfaceKilz |
2021-04-29 | Run `sed -i 's/(object)//g'`...See: https://is.gd/pL7IJF
Ran:
find . \( -type d -name .git -prune \) -o -type f -print0 | xargs -0 sed -i 's/(object)//g'
| BonfaceKilz |
2021-04-29 | base: trait: Remove unused function...* wqflask/base/trait.py (jsonable_table_row): Delete it.
| BonfaceKilz |
2021-04-29 | base: data_set: Remove unused method...* wqflask/base/data_set.py (Dataset.get_accession_id): Delete it.
| BonfaceKilz |
2021-04-29 | base: data_set: Apply pep-8 | BonfaceKilz |
2021-04-29 | base: data_set: Remove unused method...* wqflask/base/data_set.py (riset): Delete class method.
| BonfaceKilz |
2021-04-29 | base: data_set: Rewrite data_set using @dataclass...@dataclasses should be used to hold only data. Since dataset only
encapsulates data, re-writing it using a dataclass makes it more
readable and easier to follow.
| BonfaceKilz |
2021-04-29 | tests: test_data_set: Update test | BonfaceKilz |
2021-04-29 | tests: unit: test_data_set: Remove unused mock | BonfaceKilz |
2021-04-29 | wqflask: show_trait: Autopep-8 buffer | BonfaceKilz |
2021-04-29 | wqflask: show_trait: Remove unused imports....* wqflask/wqflask/show_trait/show_trait.py: Delete unused imports.
| BonfaceKilz |
2021-04-29 | wqflask: Add new js file for processing menu entries...*
wqflask/wqflask/static/new/javascript/dataset_select_menu_edit_trait.js:
New file. Copy of dataset_select_menu_orig.js that will later modified...
* wqflask/wqflask/templates/edit_trait.html: Use :point_up:.
| BonfaceKilz |
2021-04-29 | templates: edit_trait.html: Trim form to only contain selection menu | BonfaceKilz |