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AgeCommit message (Expand)Author
2013-03-09Trying to get caching working with pickle nowZachary Sloan
2013-03-08Caching is working for marker regression but really slowlyZachary Sloan
2013-03-08Refactored GWAS function in lmm.pyZachary Sloan
2013-03-07Progress bar is now completely workingZachary Sloan
2013-03-07Have first 45% of progress bar workingZachary Sloan
2013-03-07Created file temp_data to store data related to progressZachary Sloan
2013-03-06Stored percent of calculate_kinship function completion inZachary Sloan
2013-03-06Improved positioning/size of copy/print/save buttons forZachary Sloan
2013-03-05Implemented DataTables; there are now options to download the markerZachary Sloan
2013-03-02Created generate_probesetfreeze_file to create theZachary Sloan
2013-02-28Updated benchmark.py to aggregate run times when you run theZachary Sloan
2013-02-28Added benchmark.py that compares the time of various operationsZachary Sloan
2013-02-28Chromosome labels on marker regression plot are centeredZachary Sloan
2013-02-23A static progress bar now displays when loading the marker regression resultsZachary Sloan
2013-02-22Added some to notesZachary Sloan
2013-02-21Added underscore.jsZachary Sloan
2013-02-21Add my_pylmm packageZachary Sloan
2013-02-21Plot points and chromosome lines are now correctZachary Sloan
2013-02-20Did more work with manhattan plot, trying to fix a small issueZachary Sloan
2013-02-20Created y-axisZachary Sloan
2013-02-19Manhattan plot and chromosome lines are all correct nowZachary Sloan
2013-02-19Made lines for manhattan plot proportional to chromosome lengthsZachary Sloan
2013-02-15Points are labeled with marker names and hovering causes the LRSZachary Sloan
2013-02-15Made it to where hovering over a point in the manhattan plot changesZachary Sloan
2013-02-15Created lines in marker regression scatter plot separatingZachary Sloan
2013-02-14Put coffeescript code for manhattan plot into a class/functionsZachary Sloan
2013-02-14Have marker regression results displaying as a scatterplot (just the points)Zachary Sloan
2013-02-13Got results displaying for BXD and fixed genofile_parser.py to workZachary Sloan
2013-02-13Got results for marker regression page displaying in tableZachary Sloan
2013-02-13Fixed some bugs related to getting the marker regression page workingZachary Sloan
2013-02-12Edited marker_regression.py and data_set.py to store the p-valuesZachary Sloan
2013-02-08Converted .geno files to json files and wrote code in marker_regression.pyZachary Sloan
2013-02-07Added code to marker_regression.py that creates the numpy arrays toZachary Sloan
2013-02-06Edited genofile_parser.py to go through all genofiles and convertZachary Sloan
2013-02-06Added changes to example.py and prep_data.py that lets nick's code read inZachary Sloan
2013-02-06Small change to search_results.py to get search results page to workZachary Sloan
2013-01-31Added wqflask-nginx.confZachary Sloan
2013-01-31Copied over nginx.conf from /etc/nginxZachary Sloan
2013-01-31Merge branch 'flask' of https://github.com/zsloan/genenetwork into flaskZachary Sloan
2013-01-31Changed reference to 'dataset_name' in keywords to 'dataset' to getZachary Sloan
2013-01-31Changed fd to kw in search_results.py, commented out some linesZachary Sloan
2013-01-25Fixed a few bugs while trying to get the code running on the new serverZachary Sloan
2013-01-22Pushed through a few errors in getting the correlation page runningZachary Sloan
2013-01-18Renamed CorrelationPage.py to show_corr_results.pyZachary Sloan
2013-01-12Commented out a couple things in requirements.txt to get pipZachary Sloan
2013-01-11Commented out import of rpy2 in correlationFunction.py due toZachary Sloan
2013-01-11Upgraded packages requirements.txt but haven't testedZachary Sloan
2013-01-11Overwrote requirements.txtZachary Sloan
2013-01-11Trimmed a bunch of code off of marker_regression.pyZachary Sloan
2013-01-10Checking in before we try to write our own code for the manhattanZachary Sloan
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