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AgeCommit message (Expand)Author
2016-06-18Logging: behavioursPjotr Prins
2016-06-18Logger: improving outputPjotr Prins
2016-06-18Changed file permssions to non-executablePjotr Prins
2016-06-18Disable setting sys.pathsPjotr Prins
2016-06-18Logger: introducing loggingPjotr Prins
2016-06-17ConflictPjotr Prins
2016-06-17Removed trailing spaces in .py and .js filesPjotr Prins
2016-06-16Introduce behaviour parameters to facilitate developmentPjotr Prins
2016-06-16Generating the menu is now obsoletePjotr Prins
2016-06-16Menu: removing outdated .coffee file and commentsPjotr Prins
2016-06-16Menu: removed one item from JSONPjotr Prins
2016-06-16Menu: indentationPjotr Prins
2016-06-16Menu: simplifying JSON objectPjotr Prins
2016-06-16Menu: refactoring scoped varsPjotr Prins
2016-06-16Menu: jdata is no longer usedPjotr Prins
2016-06-16Menu: populate datasets dropdownPjotr Prins
2016-06-15Menu: populating tissue from RESTPjotr Prins
2016-06-15Menu: refactoring code, handling errorPjotr Prins
2016-06-14Added y axis line to probability plot and bar chart...Automatically determines number of decimal places to show on y axis of probability plot; still need to figure out how to do it with bar chart Added some logging to figure out MySQL connection issue zsloan
2016-06-14Menu: fetch group info from serverPjotr Prins
2016-06-14Make species section in data structurePjotr Prins
2016-06-14Menu: fetch species from gn_serverPjotr Prins
2016-06-07R/qtl pair scan now works again, though it takes a while (10-15 minutes)....Added pop-up warning user about run-time for pair scan Fixed links to GN2 github on the index page Fixed a couple issues with the search result page text Changed the appearance of the trait sample data table to match other tables (darker headers, etc) zsloan
2016-06-03Made a bunch of changes to correlation and search result tables (mainly the f...zsloan
2016-06-03Changed appearance of tables to more easily differentiate them from the rest ......Fixed issue where some N/A lrs scores and additive effects were being changed to 0's, which was misleading and kept them from always being sorted at the bottom. They now appear as N/A. zsloan
2016-06-02Fixed some issues with global search result tables, including:...- Wrong digits for mean expression and additive effect - Bad loooking width on some columns, like Max LRS Location - Janky functionality for column resizing and drag-and-dropping (just disabled these functions) - Geno and Pheno global search tables weren't built in the same way, so now they are I also fixed the sorting to always put N/A's at the bottom of the table by editing naturalSort.js zsloan
2016-06-01Changed global gene search to no longer use server-side processingzsloan
2016-05-31Fixed error when MrnaAssay search results didn't have a geneidzsloan
2016-05-31Renamed TEXTDIR to GENERATED_TEXT_DIRPjotr Prins
2016-05-31Allow the json dir to be in the old location.Pjotr Prins
2016-05-27Fixed issue where the Non-BXD (or whatever group/inbred set) table would show......Fixed Interquartile Range link in basic statistics table zsloan
2016-05-27Improved appearance of p values below slider in correlation menu on trait pag...zsloan
2016-05-26Merge branch 'master' of github.com:genenetwork/genenetwork2 into developmentzsloan
2016-05-26Merge branch 'master' of github.com:genenetwork/genenetwork2 into developmentzsloan
2016-05-26Merge branch 'master' of https://github.com/genenetwork/genenetwork2zsloan
2016-05-26Issue with certain samples (like BXD65a, ones were there are multiple for a s......Renamed directories with genotypes so tools.py didn't need to be changed (which might mess up other deployments) Fixed error when searching genotype data sets zsloan
2016-05-23Reaper mapping results are now correct and account for samples with two names......R/qtl and PYLMM still not working with the change and bootstrap results are also still wrong, so need to fix those issues. zsloan
2016-05-18Merge branch 'staging' of https://github.com/genenetwork/genenetwork2zsloan
2016-05-18Updated dataset selection dropdown menus and fixed error caused by traits wit...zsloan
2016-05-17Merge branch 'staging' of github.com:genenetwork/genenetwork2 into developmentzsloan
2016-05-17Merge branch 'staging' of github.com:genenetwork/genenetwork2zsloan
2016-05-17Correlations are now much faster after I disabled fetching the sample data fo...zsloan
2016-05-13Fixed path for IM bar plotPjotr Prins
2016-05-13Removing ref. to HTMLPATHPjotr Prins
2016-05-13WebqtlConfig.py: Constant handlingPjotr Prins
2016-05-13Fix paths for imagesPjotr Prins
2016-05-10Correlation successfully uses materialized views and parallel processing, but......Changed order of mapping options to display Interval Mapping first Changed some links to no longer open in new tab/window zsloan
2016-05-10Merge branch 'master' of github.com:genenetwork/genenetwork2 into merge_zachPjotr Prins
2016-04-29Fixed database link in trait page detailszsloan
2016-04-29Also fixed links in statistics section (for normal probability plot) and remo...zsloan
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