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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
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Author
2013-03-07
Have first 45% of progress bar working
Zachary Sloan
2013-03-07
Created file temp_data to store data related to progress
Zachary Sloan
2013-03-06
Stored percent of calculate_kinship function completion in
Zachary Sloan
2013-03-06
Improved positioning/size of copy/print/save buttons for
Zachary Sloan
2013-03-05
Implemented DataTables; there are now options to download the marker
Zachary Sloan
2013-03-02
Created generate_probesetfreeze_file to create the
Zachary Sloan
2013-02-28
Updated benchmark.py to aggregate run times when you run the
Zachary Sloan
2013-02-28
Added benchmark.py that compares the time of various operations
Zachary Sloan
2013-02-28
Chromosome labels on marker regression plot are centered
Zachary Sloan
2013-02-23
A static progress bar now displays when loading the marker regression results
Zachary Sloan
2013-02-22
Added some to notes
Zachary Sloan
2013-02-21
Added underscore.js
Zachary Sloan
2013-02-21
Add my_pylmm package
Zachary Sloan
2013-02-21
Plot points and chromosome lines are now correct
Zachary Sloan
2013-02-20
Did more work with manhattan plot, trying to fix a small issue
Zachary Sloan
2013-02-20
Created y-axis
Zachary Sloan
2013-02-19
Manhattan plot and chromosome lines are all correct now
Zachary Sloan
2013-02-19
Made lines for manhattan plot proportional to chromosome lengths
Zachary Sloan
2013-02-15
Points are labeled with marker names and hovering causes the LRS
Zachary Sloan
2013-02-15
Made it to where hovering over a point in the manhattan plot changes
Zachary Sloan
2013-02-15
Created lines in marker regression scatter plot separating
Zachary Sloan
2013-02-14
Put coffeescript code for manhattan plot into a class/functions
Zachary Sloan
2013-02-14
Have marker regression results displaying as a scatterplot (just the points)
Zachary Sloan
2013-02-13
Got results displaying for BXD and fixed genofile_parser.py to work
Zachary Sloan
2013-02-13
Got results for marker regression page displaying in table
Zachary Sloan
2013-02-13
Fixed some bugs related to getting the marker regression page working
Zachary Sloan
2013-02-12
Edited marker_regression.py and data_set.py to store the p-values
Zachary Sloan
2013-02-08
Converted .geno files to json files and wrote code in marker_regression.py
Zachary Sloan
2013-02-07
Added code to marker_regression.py that creates the numpy arrays to
Zachary Sloan
2013-02-06
Edited genofile_parser.py to go through all genofiles and convert
Zachary Sloan
2013-02-06
Added changes to example.py and prep_data.py that lets nick's code read in
Zachary Sloan
2013-02-06
Small change to search_results.py to get search results page to work
Zachary Sloan
2013-01-31
Added wqflask-nginx.conf
Zachary Sloan
2013-01-31
Copied over nginx.conf from /etc/nginx
Zachary Sloan
2013-01-31
Merge branch 'flask' of https://github.com/zsloan/genenetwork into flask
Zachary Sloan
2013-01-31
Changed reference to 'dataset_name' in keywords to 'dataset' to get
Zachary Sloan
2013-01-31
Changed fd to kw in search_results.py, commented out some lines
Zachary Sloan
2013-01-25
Fixed a few bugs while trying to get the code running on the new server
Zachary Sloan
2013-01-22
Pushed through a few errors in getting the correlation page running
Zachary Sloan
2013-01-18
Renamed CorrelationPage.py to show_corr_results.py
Zachary Sloan
2013-01-11
Commented out import of rpy2 in correlationFunction.py due to
Zachary Sloan
2013-01-11
Upgraded packages requirements.txt but haven't tested
Zachary Sloan
2013-01-11
Overwrote requirements.txt
Zachary Sloan
2013-01-11
Trimmed a bunch of code off of marker_regression.py
Zachary Sloan
2013-01-10
Checking in before we try to write our own code for the manhattan
Zachary Sloan
2013-01-10
Checking in before trying to put manhattan plot sections closer together
Zachary Sloan
2013-01-10
Normalized the y axis for each manhattan plot section
Zachary Sloan
2013-01-10
The plots now correctly appear above/below each other.
Zachary Sloan
2013-01-10
Edited marker_regression.coffee to make every sub-manhattan plot
Zachary Sloan
2013-01-10
Made Chromosome class in marker_regression.coffee; current
Zachary Sloan
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