Age | Commit message (Expand) | Author |
2019-02-13 | Removed pylmm references and related functions | Pjotr Prins |
2019-02-13 | Remove all coffee files | Pjotr Prins |
2019-02-12 | Added GeneWeaver linkout | zsloan |
2019-02-05 | Removed redundant header text from search page to save vertical space | zsloan |
2019-02-05 | Fixed issue with getting marker info that affected heatmap and possibly other... | zsloan |
2019-02-04 | Changed the way the table is drawn for the search pages so that it can show w... | zsloan |
2019-01-22 | Fixed issue where Haplotype Analyst in mapping results would always show resu... | zsloan |
2019-01-17 | Redid gene global search to take JSON data input instead of converting an HTM... | zsloan |
2019-01-16 | Pushing SNP browser updates | zsloan |
2019-01-11 | Got InDel working for Variant Browser | zsloan |
2018-12-21 | Fixed collections so they can be very large (1000+ traits) | zsloan |
2018-12-05 | Fixed Verify link | zsloan |
2018-12-05 | Fixed issue where SNP track for mapping did not appear correctly | zsloan |
2018-11-20 | Added option to select chromosome from trait page when mapping | zsloan |
2018-11-13 | Changed trait sample table appearance to be more compact | zsloan |
2018-11-12 | Added change to remove qtlreaper use from correlation and prevent the inconsi... | zsloan |
2018-11-05 | Fixed quantile normalization issue | zsloan |
2018-11-04 | Fixed one more thing | zsloan |
2018-11-04 | Quick fix to issue where GEMMA wouldn't be run simultaneously on traits from ... | zsloan |
2018-11-02 | Minor fix since sometimes number of samples with values wasn't counted correctly | zsloan |
2018-11-02 | Committing some changes that get non-LOCO GEMMA mapping working without using... | zsloan |
2018-11-01 | Updated the way snpbrowser initializes parameters, in preparation for drawing... | zsloan |
2018-10-24 | - SNP Browser is mostly complete; just need to test more and add SNP density ... | zsloan |
2018-10-12 | Fixed issue that caused error when mapping single-chromosome, since a second ... | zsloan |
2018-10-11 | - Added fix for GEMMA LOCO | zsloan |
2018-10-01 | Missed something when previously resolving the merge conflict | zsloan |
2018-10-01 | Resolved conflict | zsloan |
2018-10-01 | - Can now remove cofactors from correlation scatterplot and select them by ju... | zsloan |
2018-09-15 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | Pjotr Prins |
2018-09-15 | Run gemma without debug and checks in production | Pjotr Prins |
2018-08-15 | The issue with adding anonymous collections should be fixed now | zsloan |
2018-08-14 | Fixed minor issue in user_manager.py | zsloan |
2018-08-14 | Added cofactors to correlation scatterplot and changed it to use Plotly | zsloan |
2018-07-06 | Added square root transform options | zsloan |
2018-07-02 | Added option to transform/normalize trait sample values (log2 and qnorm) on t... | zsloan |
2018-06-08 | Added option to add traits to existing collection, which I had forgotten prev... | zsloan |
2018-06-08 | User collections (now stored in ElasticSearch) are reimplemented now and shou... | zsloan |
2018-05-25 | Fixed issue causing anonymous collections to not work on my branch and stagin... | zsloan |
2018-05-17 | Added script to quantile normalize a data set and enter its normalized sample... | zsloan |
2018-05-01 | Merge /home/lei/gene into testing | zsloan |
2018-05-01 | Removed all code related to using GEMMA with PLINK input files | zsloan |
2018-04-27 | Added marker filtering for data set groups with larger genotype files | zsloan |
2018-04-23 | Changed GEMMA mapping to use -lmm 2 (Likelihood ratio test) as a parameter in... | zsloan |
2018-04-19 | Changed width of top bar and a couple other html objects to 100% instead of s... | zsloan |
2018-04-18 | Removed a little more code in webqtlDatabaseFunction.py and do_search | zsloan |
2018-04-16 | Undoing changes to user_manager.py, because I think they may have caused some... | zsloan |
2018-04-16 | Resolved conflicts after pulling changes | zsloan |
2018-04-16 | Removed some unused code from collect.py and user_manager.py | zsloan |
2018-04-16 | Removed file tracer.py that wasn't being used | zsloan |
2018-04-16 | Removed a bunch of unused code from the following files: | zsloan |