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2022-01-27Moved the Show/Hide Columns text onto the same line as the buttons, to save ↵zsloan
a little vertical space
2022-01-27Changed the glossary question mark to appear at the very end of the colum ↵zsloan
text, in the hopes that this will show up normally for Rob
2022-01-27Changed search result index column to be static (so it doesn't change when ↵zsloan
the user sorts)
2022-01-27Replaced the Select Top feature with one that functions more like the Block ↵zsloan
By Index feature from the trait page; you can now use text indicating index ranges or specific indices, and the filter triggers on either hitting Enter or clicking outside of the text area
2022-01-27Moved the Show/Hide Columns text before the column buttons to save vertical ↵zsloan
space
2022-01-27Reordered search result options as described in Rob's 1/19/2022 e-mailzsloan
2022-01-27Make glossary link question marks italicized and redzsloan
2022-01-27Made the search result table wider for genotype results, since previously ↵zsloan
the Location text was being pushed to a second line (this was actually visible for me as well, not just Rob)
2022-01-27Increased the width of the location columns a bit, since they were being ↵zsloan
pushed onto a second line in some browsers (specifically Robs, but couldn't reproduce in mine, so I just changed it to something that should work for him)
2022-01-27Replaced the info icon in the Peak LOD and Effect Size columns with a ↵zsloan
superscript question mark, since the icon was appearing strangely in some browsers (namely Rob's) but in a while I couldn't reproducd
2022-01-27Fix issue where Geno query was fetching from the chr_num column instead of ↵zsloan
the Chr column (and the chr_num column isn't always populated for certain Genotype datasets)
2022-01-27Increase Y of search result table to 1000px so more rows are visible without ↵zsloan
scrolling
2022-01-27This fixes an issue where you couldn't select more than 150-200 rows when ↵zsloan
submitting search result traits to a collection; it previously just used JQuery and needed to be changed to use DataTables API to select from rows
2022-01-26update live jupyter notebooksjgart
Removed bonface's notebook until seaborn gets fixed.
2022-01-26wqflask: Ignore diffs with |ε| < 0.001BonfaceKilz
* wqflask/wqflask/metadata_edits.py (update_phenotype): Filter out values with |ε| < 0.001 when generating the diff file.
2022-01-26user_login: Remove noisy debug statementBonfaceKilz
2022-01-17update saunak's live jupyter notebookjgart
2022-01-17update live jupyter notebooksjgart
2022-01-11Removed the deferRender setting, since it appears to revent DataTables API ↵zsloan
from being able to access all rows (which caused functions like Select All to only select the first 100-200 rows)
2022-01-05metadata_edits.py: Remove duplicate importsBonfaceKilz
2022-01-05Display correct message on the # of editsBonfaceKilz
2022-01-05Insert data to db by checking the tracked deletions, mods, or addsBonfaceKilz
Prior to this, we only checked for the json files with contained the modifications. However, in the case of double deletions, and double inserts, the data would have been stored in the db anyway; which is a false representation of changes.
2022-01-05Check for any double-inserts or double-deletionsBonfaceKilz
Track any double-inserts or double-deletions
2022-01-05Remove pudb debug statementsBonfaceKilz
2022-01-05metadata_edits: Return early if uploaded csv has not been editedBonfaceKilz
2022-01-05display_diffs: Remove in-line styling from "pre" tagBonfaceKilz
2022-01-05Remove pudb lineBonfaceKilz
2022-01-05display_diffs: Use datatables for every tableBonfaceKilz
2022-01-05Make "Files for approval:" text a "h2"BonfaceKilz
2022-01-05Add interface for displaying diffs in a html pageBonfaceKilz
2022-01-05Use datatables to display approved and rejected filesBonfaceKilz
2022-01-03Added something that should work as a 'universal' solution for decoding ↵zsloan
trait descriptions in search results, since there were still some traits with encoding issues
2022-01-03Fixed wrong logic for checking for null or empty string trait descriptions ↵zsloan
in search results
2021-12-23If phenotype metadata is cached, authenticate for those traits (otherwise ↵zsloan
authentication happens in create_trait at line 105)
2021-12-23Set new_traits_metadata so caching is used (previously was always an empty dict)zsloan
2021-12-20This should fix ProbeSet trait descriptions in the search results, which ↵zsloan
previousluy weren't showing the proper description
2021-12-15Edited html for index pagezsloan
2021-12-14Removed min-width from container div, since it seems to have preventd ↵zsloan
horizontal scrolling when the window is small
2021-12-14Includes dataset name when creating SimpleNamespace dataset_ob, since it's ↵zsloan
needed during authentication
2021-12-13Fixes issue that caused LRS searches that specify position to not work ↵zsloan
properly; the queries had to be changed after integrating the change that also pulls the Max LRS info in the original query
2021-12-13pep8 formattingAlexander Kabui
2021-12-13modify endpoint for test wgcnaAlexander Kabui
2021-12-13modify template to show error generatedAlexander Kabui
2021-12-13handle connection error & other exceptionsAlexander Kabui
2021-12-13parse powers to use from form dataAlexander Kabui
2021-12-13add new endpoint:for test gn3 wgcnaAlexander Kabui
2021-12-07Made some changes to the index page HTMLArthur Centeno
2021-12-03Add mapping_scale to mapping_results.html forum inputszsloan
2021-12-03Properly set start position for cM mapping, to prevent overflow + remove ↵zsloan
some unnecessary commented out lines
2021-12-03Make sure mapping_scale is always physic when using GEMMAzsloan