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2019-10-25Added sub-categories to drop-down menu for Group optionzsloan
2019-10-24Added trait units to Histogram X axis titlezsloan
2019-10-24Changed logic for generating drop-downs such that it shows the correct ↵zsloan
Phenotypes name when there's no accession ID
2019-10-18Fixed issue with collections orderingzsloan
2019-10-18Added UniProt link and fixed issue that caused sample lists to not be formed ↵zsloan
correctly in certain situations
2019-10-17Fixed issue where incorrect N showed up when there should be no N, and fixed ↵zsloan
issue where collection pop-up when selecting cofactors was too narrow
2019-10-17Updated footer and fixed issue where Info button wouldn't work correctly ↵zsloan
with certain screen sizes
2019-10-15Fixed issue that caused scatterplot covariates feature to not workzsloan
2019-10-15Added a description with the marker name for genotype traits in collections pagezsloan
Fixed X/Y axis labels on correlation scatterplot page to correctly show genotype traits
2019-10-13Updating dataset structure again to include bxd longevity genotypeszsloan
2019-10-12The correct drop-down options should appear for the BXD-Harvested group ↵zsloan
under correlations now
2019-10-11Committing updated dataset menu file since rest api isn't working for somethingzsloan
2019-10-10Fixed issue related to Redis upgrade and changed some text on Affiliates ↵zsloan
part of home page
2019-10-09Removed All Species option from search dropdown since it wasn't working and ↵zsloan
isn't necessary
2019-10-09Made a couple more changes to syntax in affiliates list, since it was ↵zsloan
inconsistent
2019-10-09Added a couple affiliates to the index pagezsloan
2019-10-09Fixed issue where it threw an error for species other than mouse or human ↵zsloan
due to alias search
2019-10-08Fixed serious issue that caused output to be wrong for new reaper mappingzsloan
Haplotype analyst now works for GEMMA Increased margin a bit to fix minor issue with buttons getting cut off on certain Safari versions for bar chart
2019-10-04Fixed issue where there was an error if the REST API used for aliases was downzsloan
Added option to download as JPEG in addition to SVG for basic stats figures
2019-10-04Added back in the Probes option that was missing from GN2, though need to ↵zsloan
verify that the logic for showing it is correct
2019-10-03Bar chart y axis range should update with transformszsloan
Changed the way aliases are used in searches to hopefully limit results to things that make sense Fixed issue where headers didn't appear correctly for correlation results when correlating against a genotype dataset
2019-10-01Changed alias search to only search aliases in symbol fieldzsloan
Fixed issue where authors sometimes weren't encoded correctly for global search
2019-09-27Fixed an issue that caused Redis to throw an error when creating collectionszsloan
2019-09-27Added extra larger buttons to submit changes to news and other pages + fixed ↵zsloan
issue where encoding was sometimes weird for Authors in search result (still need to do this in other places)
2019-09-25Added option to edit most of the help pages except for Linkszsloan
2019-09-24Fixed issue that caused zooming for mapping to not work (that was caused by ↵zsloan
the fix for zooming into temp trait mapping results)
2019-09-24Fixed issue that caused GEMMA to not work with genotype files without cM, ↵zsloan
though this issue still needs to be dealt with to get the new qtlreaper working
2019-09-24Fixed some minor html issues with the index page and added the globe thingy ↵zsloan
that shows where people have visited from
2019-09-24Fixed issue that caused logging in to stop working with new GUIX buildzsloan
Removed some unused JS libraries
2019-09-20Converted permutation histogram to use plotlyzsloan
2019-09-20Include wikidata aliases in search; need to make it also include GN alises ↵zsloan
though
2019-09-20Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2019-09-20Revert "Migrate to newer HTMLGen"revert-366-360_update_htmlgenzsloan
2019-09-20Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2019-09-20Fixed issue where remapping or zooming in didn't work for temp/PCA traitszsloan
2019-09-20Merge branch 'testing' into 360_update_htmlgenzsloan
2019-09-09Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2019-09-09Just adding the option to remove columns from correlation results and the ↵zsloan
changes to permutation histogram and table widths
2019-09-09Revert "Add option to hide columns in correlation results"zsloan
This reverts commit cc12fe06593f4957fb2b5b641ebe7e5cf43453b1. Mistakenly included changes to tools.py that are only for the new guix build
2019-09-09Add option to hide columns in correlation resultszsloan
Increased width of permutation histogram Increased a couple table widths that had crowded header text on certain browers (maybe just Safari)
2019-09-06Fix name of javascript-twitter-post-fetcherPjotr Prins
2019-08-29Fixed issue where LOD to LRS conversions weren't showing up correctly in the ↵zsloan
table Fixed issue where non-LOCO GEMMA wasn't working correctly
2019-08-29Fixed remaining issue where columns didn't show up right and the mean/r ↵zsloan
filter didn't work right for non-ProbeSet target datasets
2019-08-29Added default Loading text for dropdownszsloan
Changed order of columns for correlatoin page and removed Y scrolling Changed name and order of top menu items some
2019-08-27Removed part of a query that was slowing down dropdown menu generation; ↵zsloan
doesn't seem to be needed, but should keep an eye out for any issues
2019-08-27Zooming on a chromosome now also zooms the genome browserzsloan
Added genome browser css because it wasn't previously committed
2019-08-27Fixed issue that caused Variant Browser to stop working (related to change ↵zsloan
to return query results as unicode) Fixed issue that was causing Indel results in the Variant Browser to not work
2019-08-26Capitalized first letter in description on trait pagezsloan
2019-08-26Output filenames are now passed around when when zooming with the new ↵zsloan
qtlreaper, so zooming into chromosomes and ranges should be faster Updated genome browser and fixed an issue where it created multiple copies when the tab was clicked repeatedly Added option to filter correlation page results by R and mean expression
2019-08-23Genome Browser only loads when the tab is clicked now, for slower ↵zsloan
computers/browsers
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