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2022-01-29Format numbers for display...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Format the numbers for display, to reduce the number of columns needed for display. Frederick Muriuki Muriithi
2022-01-29Display data for "Publish" datasets...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Display the correlations results for "Publish" datasets. Frederick Muriuki Muriithi
2022-01-29Add templates for the results tables...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Add templates for the tables that will display the results. Frederick Muriuki Muriithi
2022-01-29Add elements to display results. Provide PoC JS...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Add some html elements to be used to display the results of running the partial correlations * Provide some initial proof-of-concept javascript code to animate the various elements and to use for displaying both successful and error results. Frederick Muriuki Muriithi
2022-01-29Use list rather than tuple...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Using a tuple, rather than a list for the HTTP methods in the route definition causes an error. This fixes that by using a list. Frederick Muriuki Muriithi
2022-01-29Skip the target traits selection step...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Skip the target traits selection step, and only allow running the partial correlations against one of the available databases. Frederick Muriuki Muriithi
2022-01-29Implement better styling...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Separate the form elements that allow selection from the elements that display previous selections. This allows styling of the "active" area of the form in a different way from the "display" area of the form, allowing the user to see information on their previous choices, even while making further selections for the partial correlations. Frederick Muriuki Muriithi
2022-01-29Add "Partial Correlations" UI elements on collections page...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Add UI elements to trigger the partial correlations feature * Connect partial correlation view to the application * Point to correct application element for gunicorn Frederick Muriuki Muriithi
2022-01-27Highlight rows selected by filterByIndex...This adds the "selected" class to rows selected by filterByIndex, which adds highlighting to them I also made the variables in this part of the code camel cased zsloan
2022-01-27Changed var to letzsloan
2022-01-27Removed unused variables codezsloan
2022-01-27Added the div for showing the error when the Select Rows text has wrong syntaxzsloan
2022-01-27Replaced the try/catch with something checking for the correct pattern with r...zsloan
2022-01-27Added a comment explaining what the parseIndexString function doeszsloan
2022-01-27Replaced a confusing for loop with something that is (hopefully) easier to re...zsloan
2022-01-27Changed functions in search_results.js to be camelCased, except for change_bu...zsloan
2022-01-27Removed unnecessary variable from for-loop in parse_index_stringzsloan
2022-01-27Changed the placeholder text for the table search to Search Forzsloan
2022-01-27Added some JS disabling form submission on hitting Enter, so that users can h...zsloan
2022-01-27Moved the Show/Hide Columns text onto the same line as the buttons, to save a...zsloan
2022-01-27Changed the glossary question mark to appear at the very end of the colum tex...zsloan
2022-01-27Changed search result index column to be static (so it doesn't change when th...zsloan
2022-01-27Replaced the Select Top feature with one that functions more like the Block B...zsloan
2022-01-27Moved the Show/Hide Columns text before the column buttons to save vertical s...zsloan
2022-01-27Reordered search result options as described in Rob's 1/19/2022 e-mailzsloan
2022-01-27Make glossary link question marks italicized and redzsloan
2022-01-27Made the search result table wider for genotype results, since previously the...zsloan
2022-01-27Increased the width of the location columns a bit, since they were being push...zsloan
2022-01-27Replaced the info icon in the Peak LOD and Effect Size columns with a supersc...zsloan
2022-01-27Fix issue where Geno query was fetching from the chr_num column instead of th...zsloan
2022-01-27Increase Y of search result table to 1000px so more rows are visible without ...zsloan
2022-01-27This fixes an issue where you couldn't select more than 150-200 rows when sub...zsloan
2022-01-26update live jupyter notebooks...Removed bonface's notebook until seaborn gets fixed. jgart
2022-01-26wqflask: Ignore diffs with |ε| < 0.001...* wqflask/wqflask/metadata_edits.py (update_phenotype): Filter out values with |ε| < 0.001 when generating the diff file. BonfaceKilz
2022-01-26user_login: Remove noisy debug statementBonfaceKilz
2022-01-17update saunak's live jupyter notebookjgart
2022-01-17update live jupyter notebooksjgart
2022-01-11Removed the deferRender setting, since it appears to revent DataTables API fr...zsloan
2022-01-05metadata_edits.py: Remove duplicate importsBonfaceKilz
2022-01-05Display correct message on the # of editsBonfaceKilz
2022-01-05Insert data to db by checking the tracked deletions, mods, or adds...Prior to this, we only checked for the json files with contained the modifications. However, in the case of double deletions, and double inserts, the data would have been stored in the db anyway; which is a false representation of changes. BonfaceKilz
2022-01-05Check for any double-inserts or double-deletions...Track any double-inserts or double-deletions BonfaceKilz
2022-01-05Remove pudb debug statementsBonfaceKilz
2022-01-05metadata_edits: Return early if uploaded csv has not been editedBonfaceKilz
2022-01-05display_diffs: Remove in-line styling from "pre" tagBonfaceKilz
2022-01-05Remove pudb lineBonfaceKilz
2022-01-05display_diffs: Use datatables for every tableBonfaceKilz
2022-01-05Make "Files for approval:" text a "h2"BonfaceKilz
2022-01-05Add interface for displaying diffs in a html pageBonfaceKilz
2022-01-05Use datatables to display approved and rejected filesBonfaceKilz