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2015-12-04Commented out code related to additive/dominance effect in gn1 marker regress...zsloan
2015-11-18Fixed issue where literature and tissue correlation didn't work...Scatterplot matrix feature only appears if user is logged in now Committing current progress on mapping page (it can at least import the file now, but there are still errors) zsloan
2015-11-09Fixed issue that caused mapping to not work; for some reason the path to pylm...zsloan
2015-11-05Fixed issue where misplaced html comment end hid all phenotype table resultszsloan
2015-10-23Fixed error if you click search after entering white spaces; Ethan's fix only...zsloan
2015-10-23Merge pull request #128 from sn3twork/issues/126...Fixes issue #126. zsloan
2015-10-22Fixes issue #126. Fixed broken references to dbdoc folder. They now all...point to static/dbdoc. Added static/dbdoc folder. Ethan Willis
2015-10-22Fixes issue #98. Doesn't submit search request if the search request...contains *only* whitespace. Ethan Willis
2015-10-22Merge branch 'master' of github.com:genenetwork/genenetwork2zsloan
2015-10-22Added factor loadings table and plot (though need to finish improving plot st......Fixed issue where cM locations for R/qtl were displayed as Mb and had used Mb Chr lenghts for the scale zsloan
2015-10-20Merge pull request #124 from sn3twork/enhancement/ui/wgcna_setup...Updated wgcna_setup to use Bootstrap error messages and form styling.zsloan
2015-10-20Updated wgcna_setup to use Bootstrap error messages and form styling.Ethan Willis
2015-10-19Enhancement of fix for bug #98. Refuses submission of search form if...search terms are empty. This avoids an internal server error. Ethan Willis
2015-10-12Changed the location filter for correlation pagezsloan
2015-10-12Fixed an error page that occurs if traits with no overlapping samples are use...zsloan
2015-10-09Merge branch 'master' of github.com:zsloan/genenetwork2zsloan
2015-10-09Fixed correlations for phenotype datasets...Fixed table for some expression dataset searches Added collection button to correlation page Added color gradient to correlation matrix zsloan
2015-10-08Committer: Lei Yan <lei@penguin.uthsc.edu>...On branch master Lei Yan
2015-10-08Using the correct NA from Rpy2DannyArends
2015-10-08Minor, adding a better check for NADannyArends
2015-10-08Adding more commentsDannyArends
2015-10-08Merge branch 'master' of github.com:genenetwork/genenetwork2 into WGCNAintegr...DannyArends
2015-10-08User inputs are now passed to the algorithm, and power is tested, and autosel...DannyArends
2015-10-08Massive update to the templates, adding error checking and handling + the eig...DannyArends
2015-10-07Adding library for slider used with correlation toolzsloan
2015-10-07The results now show the soft thresholds table, and the gene <-> module tableDannyArends
2015-10-07Passing more information calculated by WGCNA to the results pageDannyArends
2015-10-07Merge branch 'master' of github.com:genenetwork/genenetwork2 into WGCNAintegr...DannyArends
2015-10-05Correlation Matrix page is partially complete + fixed some issues with column...zsloan
2015-09-27Merge branch 'master' of github.com:genenetwork/genenetwork2 into WGCNAintegr...DannyArends
2015-09-25Forgot to add the table-striped class to the basic stats table to make its st...zsloan
2015-09-25Made the basic statistics table look nicer and got rid of the foo column if o...zsloan
2015-09-24Location range feature should work for correlations now, though the interface...zsloan
2015-09-20Using the webqtlConfig.TMPDIR constant and the webqtlUtil.genRandStr functionDannyArends
2015-09-20Now able to run WGCNA analysis on a user defined collection, still lots of todosDannyArends
2015-09-20Display the results from WGCNA updatedDannyArends
2015-09-20Transfering data from python to R for WGCNA analysis using Rpy2DannyArends
2015-09-20Updating the WGCNA setup and results templatesDannyArends
2015-09-19Adding a todo list to the code, for issue: genenetwork/genenetwork2#119DannyArends
2015-09-19Adding views and passing the trait_list information from setup to resultsDannyArends
2015-09-192 templates, 1 for user input and 1 for showing the resultsDannyArends
2015-09-19Merge branch 'master' of github.com:genenetwork/genenetwork2 into WGCNAintegr...DannyArends
2015-09-18Filter by min expression and r range now works, though interface for slider c...zsloan
2015-09-17Merge branch 'master' of github.com:genenetwork/genenetwork2 into WGCNAintegr......Staying up2date DannyArends
2015-09-11Merge branch 'master' of github.com:genenetwork/genenetwork2zsloan
2015-09-11Fixed issue causing error if trying to use Heatmap or Correlation Matrix with......Fixed tables in correlation page and trait page to separate index column and checkbox column zsloan
2015-09-11Removing import pandas from codeDannyArends
2015-09-11More fiddling with templatesDannyArends
2015-09-11Figured out how those flask templates work, analysis broken down into 3 parts...DannyArends
2015-09-11Some more work on the analysisDannyArends