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genenetwork2
acenteno
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blatseq_fix
chores/code-refactoring
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penguin2
phewas
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refactor-data_set_py-20220920
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Author
2016-04-07
Permutation figure and x-axis label should change to correctly reflect the ma...
zsloan
2016-04-07
SNP Track option should now work for GN1 mapping figure
zsloan
2016-04-06
The option to switch between LRS and LOD for the GN1 mapping figure should no...
zsloan
2016-04-06
Setting lodm to always be 1.0 fixes the issue where it would incorrectly disp...
zsloan
2016-04-06
Permutations (suggestive/significant lines, legend, and histogram) should now...
zsloan
2016-04-05
Bootstrap test should now work correctly for qtl reaper mapping method on ful...
zsloan
2016-04-05
Fixed issue where haplotype analyst option would appear when using genetic(ce...
zsloan
2016-03-30
Disabled Haplotype Analyst option if mapping scale is centimorgan/genetic
zsloan
2016-03-30
GN1 mapping now when mapping scale is centimorgan (for R/qtl)
zsloan
2016-03-29
Additive effect option now works for GN1 mapping figure
zsloan
2016-03-29
Forgot to add GeneralObject file needed for haplotype analyst in last commit
zsloan
2016-03-29
Haplotype Analyst now works for GN1 mapping figure
zsloan
2016-03-28
Legend option now works for GN1 mapping figure
zsloan
2016-03-28
Trait sample data table width now dynamically changes with number of attribut...
zsloan
2016-03-24
Graph width can now be set in Mapping Results
zsloan
2016-03-24
Add the Gene Track option to display the Gene Band for single chromosome view
zsloan
2016-03-24
Mapping results table is now limited to the top 200 markers; previously the p...
zsloan
2016-03-23
You can now select chromosome and an Mb range from the top menu and remap
zsloan
2016-03-23
Fixed GN1 mapping plots so that Y axis and the Y coordinates of manhattan plo...
zsloan
2016-03-21
Manhattan plot option now works for GN1 map, and GEMMA is set to display as m...
zsloan
2016-03-21
Changed code parsing marker csv file to increase GEMMA speed
zsloan
2016-03-18
Forgot to not retrieve sample data for the phenotype global search with the l...
zsloan
2016-03-18
Replaced header with other information in qtl map
zsloan
2016-03-15
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-03-15
Merge branch 'master' of https://github.com/genenetwork/genenetwork2
zsloan
2016-03-15
Fixed the mapping figure track that lets you zoom into a smaller range
zsloan
2016-03-14
Changed the way headers look across all pages
zsloan
2016-03-03
Fixed issue where correlation would do mapping if run after mapping
zsloan
2016-03-03
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-03-03
Fixed trait export to include SE values
zsloan
2016-03-03
Merge branch 'master' of https://github.com/genenetwork/genenetwork2
zsloan
2016-03-03
Update gsearch.py
Lei Yan
2016-03-02
Increased gsearch speed by removing unnecessary query for sample data
zsloan
2016-03-01
Merge branch 'master' of https://github.com/genenetwork/genenetwork2
zsloan
2016-03-01
Committing change to dataset menu before pull
zsloan
2016-03-01
Fixed csv download and removed non-working "Download Table" button for collec...
zsloan
2016-02-26
PLINK should not run correctly and graph using GN1 image
zsloan
2016-02-25
fixed untracked files
zsloan
2016-02-24
GEMMA mostly working with gn1 mapping, though there may be some issue with th...
zsloan
2016-02-18
Edited gen_select_dataset to remove confidential datasets
zsloan
2016-02-15
Fixed R/qtl mapping so the group (BXD, etc) isn't hardcoded
zsloan
2016-02-11
Updated jquery validation plugin, now works in IE
zsloan
2016-02-08
Fixed the logic if how the correlation page applies filters (mean expression,...
zsloan
2016-02-08
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-02-08
gitignore: resolved conflict
pjotrp
2016-02-04
Most importantly, this commit fixes an issue that caused the trait page to no...
zsloan
2016-01-29
Info button should now work for phenotype and genotype datasets
zsloan
2016-01-27
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-01-27
Added info button to Dataset dropdown on index page
zsloan
2016-01-26
Removed a bunch of files/directories/packages that are no longer used and som...
zsloan
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