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2013-07-12Rewrote code related to getting the tissue correlation column to display...Created new files for mrna assay tissue data and commonly used db query related functions Lei Yan
2013-07-11Began changing the style of the code related to the tissue correlation column...of the correlation page Lei Yan
2013-07-10Updated gn_installation_notesZachary Sloan
2013-07-09Committing installation notes before editing them moreZachary Sloan
2013-07-05Change Correlation table value formatLei Yan
2013-07-03Updated notes and created requirements.txt fileZachary Sloan
2013-07-03Merge /home/zas1024/geneLei Yan
2013-07-03Made the table in the group manager sortable, etcZachary Sloan
2013-06-27Created a group manager page where user administrators can create...groups of datasets to give/add read privileges to Zachary Sloan
2013-06-27Fixed N Cases column on correlation results pageLei Yan
2013-06-26Merge /home/sam/geneZachary Sloan
2013-06-26More signin changesSam
2013-06-26Moved code creating DataSets object to a function in dataset.py...Added caching to creating DataSets object Zachary Sloan
2013-06-26Got code that creates DataSets object running...Fixed one genofile that had extra quotation marks in the comments that caused an error Defaults mb_graph_interval to 1 for species without chromosome lengths in megabases Zachary Sloan
2013-06-25Added DataSets class to dataset.py that will be used to create list of...confidential datasets Zachary Sloan
2013-06-25Merge git://github.com/zsloan/genenetwork into flaskLei Yan
2013-06-21Added a thank you for siging in message...Fixed issues where homepage was reloaded in modal after siging in Sam
2013-06-21Merge /home/zas1024/geneSam
2013-06-21Working on getting logins working againSam
2013-06-21Fixed bug where cursor was still being used in queryZachary Sloan
2013-06-20Merge branch 'flask' of /home/sam/gene...Conflicts: wqflask/wqflask/templates/index_page.html Zachary Sloan
2013-06-20Added file corr_result_helpers.py that includes the function that...normalizes the lists of sample values Zachary Sloan
2013-06-20Fixed conflict of mergeSam
2013-06-20Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/requirements.txt wqflask/wqflask/correlation/show_corr_results.py Zachary Sloan
2013-06-20Copied over Lei's correlation code from after he pushed yesterdayZachary Sloan
2013-06-19Moved the normalize_values function to separate file corr_result_helpers.py...Added docstring test to normalize_values Number of overlapping samples column now displays correctly in the correlation results page Lei Yan
2013-06-19Added nginx_conf directory to git trackingLei Yan
2013-06-19Fixed issue where the Mean Expr, Max LRS, and Max LRS Location columns...in the correlation page weren't displaying Lei Yan
2013-06-19Merge branch 'flask' of git://github.com/zsloan/genenetwork into flask...Conflicts: wqflask/base/data_set.py Lei Yan
2013-06-19:Merge git://github.com/zsloan/genenetwork into flask...Conflicts: wqflask/requirements.txt Lei Yan
2013-06-19Changed QTL parameter name to "get_qtl_info" on trait.py and...other places it's called, like search_results.py Added other trait info fields to correlation results page Lei Yan
2013-06-19When I pulled Sam's code the search page was changed from GET to...POST in views.py, so I had to change it back Zachary Sloan
2013-06-19Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/base/data_set.py wqflask/wqflask/views.py Fixed a couple conflicts to merge Lei's code related to the correlation page Zachary Sloan
2013-06-14Merge git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/requirements.txt Made small change for merge with Lei's branch Zachary Sloan
2013-06-13Made a few changes while trying to figure out why the search isn't working...post-merging with Sam's code Zachary Sloan
2013-06-13Merge /home/sam/gene into flask...Conflicts: wqflask/wqflask/templates/index_page.html Merging the code on Sam's branch onto my own Zachary Sloan
2013-06-13Fixed issue where too much memory was used as a result of creating a...dataset object for each trait in the correlation results Added new fields/columns for each trait in the correlation result table (max LRS, max LRS location, mean expression) Fixed error if trait doesn't have these fields Lei Yan
2013-06-13Put the template html for the quick search page when all trait types...are displayed in a separate file that is included in quick_search.html Zachary Sloan
2013-06-13Small changesSam
2013-06-12Fixed a couple issues with the template that caused the...regular search results and show trait page to not display Zachary Sloan
2013-06-11Put trait info for correlation results page into a dictionary instead...of storing list of GeneralTrait objects Added print statements to track memory usage Lei Yan
2013-05-31Fixed the location column for the quick search page...Began writing some jquery to automatically open the first tab within each species tab on the quick search page (not done yet) Zachary Sloan
2013-05-30Rewrote some code in get_trait_info in dataset.py...Added spearman correlation to show_corr_results and template Lei Yan
2013-05-28Have correlation values appearing in a table in the template...Use scipy to calculate pearson correlation instead of old GN code Lei Yan
2013-05-23Worked on rewriting the function in data_set.py that gets the sample...values for each trait Lei Yan
2013-05-23Changed the way the query that gets sample ids is generatedLei Yan
2013-05-23Now calculates correlation values for traits, but not yet in templateLei Yan
2013-05-23Added a templateSam
2013-05-23Lots of changes around usersSam
2013-05-21Added caching to the search page (for both regular and quick searckes)Zachary Sloan
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