Age | Commit message (Expand) | Author |
---|---|---|
2021-10-10 | ui:show phenotypes page | Alexander Kabui |
2021-10-10 | minor fixes for ui | Alexander Kabui |
2021-10-10 | modifications for wgcna form page | Alexander Kabui |
2021-10-10 | enable wgcna in gn2 toolbar | Alexander Kabui |
2021-10-10 | pep8 formatting && remove unused functions | Alexander Kabui |
2021-10-10 | call run_wgcna in views && render test template | Alexander Kabui |
2021-10-10 | pep8 formatting fix for parsing response data | Alexander Kabui |
2021-10-09 | add function to call wgcna api | Alexander Kabui |
2021-10-09 | add function to process trait sample data | Alexander Kabui |
2021-10-09 | function to fetch trait data | Alexander Kabui |
2021-10-09 | add function to process image data | Alexander Kabui |
2021-10-09 | unittest for processing wgcna output | Alexander Kabui |
2021-10-09 | add function to process gn3 wgcna output | Alexander Kabui |
2021-10-08 | Fixed some issues with scale and score_type in mapping export + include mappi... | zsloan |
2021-10-08 | Fix issue where outliers weren't being highlighted for rows drawn by Scroller... | zsloan |
2021-10-06 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into clustered_... | Frederick Muriuki Muriithi |
2021-10-06 | display images | Alexander Kabui |
2021-10-06 | Enable selection of heatmap orientation...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/non-clustered-heatmaps-and-flipping.gmi * Provide the user with the UI elements to enable them select the orientation of the heatmap that will be produced. | Frederick Muriuki Muriithi |
2021-10-06 | tests: test_run_mapping: Add missing "name" attribute to tests | BonfaceKilz |
2021-10-06 | tests: test_run_mapping: Add missing calls...After adding the missing attribute to "self.trait", we need to also need to update some missing calls. | BonfaceKilz |
2021-10-06 | tests: test_run_mapping: Fix failing assert when getting perm strata | BonfaceKilz |
2021-10-06 | tests: test_run_mapping: Add missing attribute to "self.trait" | BonfaceKilz |
2021-10-06 | tests: test_run_mapping: Add missing positional argument "vals_hash" | BonfaceKilz |
2021-10-06 | add datatable for eigengenes | Alexander Kabui |
2021-10-05 | Merge branch 'testing' into feature/add_resizeable_columns | zsloan |
2021-10-05 | code format for wgcna results file | Alexander Kabui |
2021-10-05 | js formatting | Alexander Kabui |
2021-10-05 | move xterm code to setup | Alexander Kabui |
2021-10-05 | work on wgcna_setup form | Alexander Kabui |
2021-10-04 | Changed get_user_groups to pull both the ID and details in the for loop from ... | zsloan |
2021-10-04 | Add group link for user member groups | zsloan |
2021-10-04 | wqflask: resource_manager: Remove logger | BonfaceKilz |
2021-10-04 | Remove "_scripts.html" and all it's references | BonfaceKilz |
2021-10-04 | new_security: login_user.html: Delete commented out block | BonfaceKilz |
2021-10-04 | Replace hard-coded e-mails with gn-proxy queries...* wqflask/wqflask/decorators.py (edit_access_required.wrap): Query the proxy to see the access rights of a given user. | BonfaceKilz |
2021-10-04 | Rename "admin_login_required" to "edit_access_required" | BonfaceKilz |
2021-10-01 | add xterm web terminal | Alexander Kabui |
2021-09-29 | test template for gn3 wgcna | Alexander Kabui |
2021-09-27 | Apply pep-8 formatting | BonfaceKilz |
2021-09-27 | Remove variable-- named after a python keyword-- called "list" | BonfaceKilz |
2021-09-27 | Remove lengthy stack trace for 404, 400, 408 status codes...The stack trace causes the log file to grow into unmanageable sizes over time. | BonfaceKilz |
2021-09-25 | Add progress indicator. Handle errors....Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * Add a progress indicator to show the user that there is some progress happening, so that they can wait. Add a function to handle any errors that arise. | Frederick Muriuki Muriithi |
2021-09-25 | Remove hard-coded URL; use configured URL...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * etc/default_settings.py: remove duplicate configuration variable * wqflask/wqflask/collect.py: use the configured url for the API server Use the configured URL rather that the hard-coded URL that was used for testing out the clustered heatmap generation. | Frederick Muriuki Muriithi |
2021-09-23 | Clear any existing image on subsequent clicks...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * If the user clicks on the "Clustered Heatmap" button, the system should remove any previously existing clustered heatmap image and replace it with the new image. | Frederick Muriuki Muriithi |
2021-09-23 | Move the heatmap display area to before the table...Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * Move the heatmap area to before the data table, so that once the heatmap is generated, it shows up before the table, and the user is able to see what happened. | Frederick Muriuki Muriithi |
2021-09-22 | Removed the Control for (marker) option from R/qtl for now since Danny mentio... | zsloan |
2021-09-22 | Fixed issue where the control marker parameter was being passed incorrectly t... | zsloan |
2021-09-22 | Only show most search page options if results exist; otherwise provide a link... | zsloan |
2021-09-22 | Added type='button' to the Delete Collection button within collections/view, ... | zsloan |
2021-09-22 | Remove references to reaper_version and code for running old qtlreaper | zsloan |