genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2021-10-06	tests: test_run_mapping: Fix failing assert when getting perm strata	BonfaceKilz
2021-10-06	tests: test_run_mapping: Add missing attribute to "self.trait"	BonfaceKilz
2021-10-06	tests: test_run_mapping: Add missing positional argument "vals_hash"	BonfaceKilz
2021-10-04	Changed get_user_groups to pull both the ID and details in the for loop from ...	zsloan
2021-10-04	Add group link for user member groups	zsloan
2021-10-04	wqflask: resource_manager: Remove logger	BonfaceKilz
2021-10-04	Remove "_scripts.html" and all it's references	BonfaceKilz
2021-10-04	new_security: login_user.html: Delete commented out block	BonfaceKilz
2021-10-04	Replace hard-coded e-mails with gn-proxy queries	BonfaceKilz
2021-10-04	Rename "admin_login_required" to "edit_access_required"	BonfaceKilz
2021-09-27	Apply pep-8 formatting	BonfaceKilz
2021-09-27	Remove variable-- named after a python keyword-- called "list"	BonfaceKilz
2021-09-27	Remove lengthy stack trace for 404, 400, 408 status codes	BonfaceKilz
2021-09-22	Removed the Control for (marker) option from R/qtl for now since Danny mentio...	zsloan
2021-09-22	Fixed issue where the control marker parameter was being passed incorrectly t...	zsloan
2021-09-22	Only show most search page options if results exist; otherwise provide a link...	zsloan
2021-09-22	Added type='button' to the Delete Collection button within collections/view, ...	zsloan
2021-09-22	Remove references to reaper_version and code for running old qtlreaper	zsloan
2021-09-20	Returned the GN1 url to gn1.genenetwork.org since it's apparently working wel...	zsloan
2021-09-20	Removed the reaper_version selection option, since original qtlreaper is no l...	zsloan
2021-09-20	Added back the option to edit privileges on trait pages, since the metadata e...	zsloan
2021-09-16	wqflask: views: Redirect to the correct URL after phenotype update	BonfaceKilz
2021-09-14	Replace / with _ in the mapping results filename, due to / causing issues wit...	zsloan
2021-09-14	Replace / with _ in the file hashes in rqtl_mapping.py, since they get transl...	zsloan
2021-09-13	Change mapping export filename to use the path passed from run_mapping, inste...	zsloan
2021-09-13	Change mapping export filename to use the trait hash	zsloan
2021-09-13	Add trait name and trait hash to exported mapping results	zsloan
2021-09-13	Include some extra metadata in the mapping page details (in addition to the f...	zsloan
2021-09-13	Change Genotype File text to only show the meaningful genotype deescription	zsloan
2021-09-13	Temporarily point the View in GN1 button to gn1-lily.genenetwork.org since so...	zsloan
2021-09-11	Add Jupyter Notebook Launcher to Tools dropdown menu	jgart
2021-09-10	Fix issue with the way the template was checking if genofile_string was set; ...	zsloan
2021-09-10	Removed encoding, since it's apparently not needed since the Python 3 switcho...	zsloan
2021-09-09	Change trait name to display name in the metadata at the top of the page (so ...	zsloan
2021-09-09	Replaced trait name with trait display name in display_mapping_results so the...	zsloan
2021-09-07	Add trait hash and datetime to mapping figure	zsloan
2021-09-07	Add timer to loading page to track how long the process has been running	zsloan
2021-09-05	Fixed issue that caused sample data to not be fetched correctly; there's some...	zsloan
2021-09-03	Allow categorical_var_list to be passed as a template variable	zsloan
2021-09-03	Fix issue that caused javascript to not work on the R/qtl mapping result page...	zsloan
2021-09-03	Fix issue where values written to phenotype file for R/qtl sometimes had trai...	zsloan
2021-08-25	Fix issue where correlation results weren't included parents/f1s	zsloan
2021-08-25	Fixed issue in get_diff_of_vals that caused the diff to be calculated wrong (...	zsloan
2021-08-25	Add map scale option that was missing for groups with only a single genotype ...	zsloan
2021-08-25	Fix issue that could cause an error when doing cM mapping	zsloan
2021-08-25	Fix issue that could cause mapping_scale to not be set correctly in show_trai...	zsloan
2021-08-23	Removed unused variable from list of 'wanted' variables for mapping	zsloan
2021-08-23	Fixed issue with the way categorical_vars and perm_strata were being passed t...	zsloan
2021-08-23	Account for situations where the minimum permutation value is also above webq...	zsloan
2021-08-23	Fix get_perm_strata to usethe Ids for case attributes instead of names + allo...	zsloan