| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2015-05-15 | Position search now works for mRNA assay and genotype data sets | zsloan | |
| 2015-05-13 | Fixed issue where you could change the Make Default button's text | zsloan | |
| 2015-05-13 | Fixed sorting on the trait page so that x values always appear at the bottom | zsloan | |
| 2015-05-13 | Improved sorting for columns with N/A or missing values | zsloan | |
| 2015-05-13 | Merge pull request #39 from pjotrp/master | zsloan | |
| Refactoring finding tools such as pylmm | |||
| 2015-05-13 | comment out sql query logging | Artem Tarasov | |
| 2015-05-13 | combine three similar queries into one | Artem Tarasov | |
| 2015-05-13 | replace multiple tissue queries with a single one | Artem Tarasov | |
| 2015-05-13 | cache datasets for each group | Artem Tarasov | |
| 2015-05-12 | Add info to warning | pjotrp | |
| 2015-05-12 | Remove app line | pjotrp | |
| 2015-05-12 | More elaborate handling of finding pylmm | Pjotr Prins | |
| 2015-05-12 | Move path search into tools.py | pjotrp | |
| 2015-05-12 | Resolved conflict before commit | zsloan | |
| 2015-05-12 | Merge branch 'master' of github.com:genenetwork/genenetwork2 | zsloan | |
| 2015-05-12 | Just removed some code that wasn't being used | zsloan | |
| 2015-05-12 | Merge pull request #20 from lomereiter/issue11 | zsloan | |
| Fixes #11 (buttons on collection page) | |||
| 2015-05-12 | Fix #35 | Artem Tarasov | |
| * 'aliases' and 'location' are shown only where relevant * descriptions for phenotype datasets are provided at the top | |||
| 2015-05-11 | Show PYLMM_PATH on error | Pjotr Prins | |
| 2015-05-11 | Moved chunks | Pjotr Prins | |
| 2015-05-11 | More pylmm dependencies disabled | pjotrp | |
| 2015-05-11 | Remove outdated code | pjotrp | |
| 2015-05-11 | Moving pylmm out of the tree | pjotrp | |
| 2015-05-11 | pylmm has moved out of the GN2 source tree to ↵ | pjotrp | |
| https://github.com/genenetwork/pylmm_gn2 | |||
| 2015-05-11 | Fixed gen_select_dataset so that it does not include Phenotype and | zsloan | |
| Genotype groups when the corresponding data sets do not exist Interval Mapping no longer shows up for human traits Fixed the appearance of the mirror links on the main page | |||
| 2015-05-08 | Merge github.com:genenetwork/genenetwork2 | zsloan | |
| 2015-05-08 | Committing before pulling latest changes/fixes | zsloan | |
| 2015-05-08 | updating histogram on values' change (#28) | Artem Tarasov | |
| 2015-05-08 | fix histogram bin width | Artem Tarasov | |
| It was calculated wrongly when bins began from a non-zero value | |||
| 2015-05-08 | fix | Artem Tarasov | |
| 2015-05-08 | Fix #29 | Artem Tarasov | |
| The number of bins was set to 20 for all datasets. Changed the number to be sqrt(#samples) as suggested on Wikipedia. | |||
| 2015-05-07 | Excel export of trait data | Artem Tarasov | |
| 2015-05-07 | fix CSV export of trait data | Artem Tarasov | |
| 2015-05-07 | allow for attribute table to not exist | Artem Tarasov | |
| 2015-05-06 | fix spacing | Artem Tarasov | |
| 2015-05-06 | collection/view: bring buttons back | Artem Tarasov | |
| 2015-05-06 | email and pass validation | Artem Tarasov | |
| 2015-05-01 | Commented out imports of a few files that aren't used yet or stored in git | zsloan | |
| 2015-05-01 | Added Pjotr's latest pylmm changes | zsloan | |
| Added GEMMA and necessary plink-format genotype files in gemma directory Added the GEMMA genotype files to git LFS Removed some unnecessary/duplicated code from interval_mapping.py Separated GEMMA mapping code into its own file (will also do this for other methods) and fixed and issue that caused it to not run Added the table to the pair scan results page and wrote some code adding its attributes to each marker object, but it still isn't working yet | |||
| 2015-04-10 | Added git large file system (the .gitattributes files) and fixed an issue ↵ | zsloan | |
| where rat trait pages wouldn't work | |||
| 2015-04-06 | Added secure_server.py to gitignore and fixed conflicts for merging Lei's ↵ | zsloan | |
| new code | |||
| 2015-04-06 | Just committing a couple minor bug fixes to get code working after pulling ↵ | zsloan | |
| Pjotr's latest changes | |||
| 2015-04-06 | Merge branch 'master' of github.com:zsloan/genenetwork2 | zsloan | |
| 2015-04-06 | Removed the old news code before pulling over Lei's changes | zsloan | |
| Removed the SharingPage import from views since it doesn't exist anymore | |||
| 2015-04-06 | Merge pull request #3 from pjotrp/master | zsloan | |
| 0.50-gn2-pre1 | |||
| 2015-04-06 | Removed dataSharing directory and its files since they aren't being used, | zsloan | |
| but I should note that a couple of them were changed from GN1; I think that there was some attempt to implement this very early into GN2's development, but we'd probably be better off starting from scratch since a number of things have changed since then (such as the way we call queries) Removed the Singapore link from the mirrors section of the index page since it wasn't working | |||
| 2015-03-31 | Fixed some aesthetic issues on the main page and removed references to ↵ | zsloan | |
| TemplatePage | |||
| 2015-03-30 | Merge with zsloan master | Pjotr Prins | |
| 2015-03-27 | Changed HTMLPATH in webqtlConfig since I forgot to in the last commit (since ↵ | zsloan | |
| it used to point to the now-renamed 'web' directory). It obviously also needs to be renamed later, but I'll have to find every place that calls webqtlConfig.HTMLPATH first to do so. | |||
| 2015-03-27 | Removed everything from 'web' directory except genofiles and renamed the ↵ | zsloan | |
| directory to 'genotype_files' | |||
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index : genenetwork2 | |
| GeneNetwork (2nd generation) |
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