genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2013-02-20	Created y-axis	Zachary Sloan
2013-02-19	Manhattan plot and chromosome lines are all correct now	Zachary Sloan
2013-02-19	Made lines for manhattan plot proportional to chromosome lengths	Zachary Sloan
2013-02-15	Points are labeled with marker names and hovering causes the LRS	Zachary Sloan
2013-02-15	Made it to where hovering over a point in the manhattan plot changes	Zachary Sloan
2013-02-15	Created lines in marker regression scatter plot separating	Zachary Sloan
2013-02-14	Put coffeescript code for manhattan plot into a class/functions	Zachary Sloan
2013-02-14	Have marker regression results displaying as a scatterplot (just the points)	Zachary Sloan
2013-02-13	Got results displaying for BXD and fixed genofile_parser.py to work	Zachary Sloan
2013-02-13	Got results for marker regression page displaying in table	Zachary Sloan
2013-02-13	Fixed some bugs related to getting the marker regression page working	Zachary Sloan
2013-02-12	Edited marker_regression.py and data_set.py to store the p-values	Zachary Sloan
2013-02-08	Converted .geno files to json files and wrote code in marker_regression.py	Zachary Sloan
2013-02-07	Added code to marker_regression.py that creates the numpy arrays to	Zachary Sloan
2013-02-06	Edited genofile_parser.py to go through all genofiles and convert	Zachary Sloan
2013-02-06	Added changes to example.py and prep_data.py that lets nick's code read in	Zachary Sloan
2013-02-06	Small change to search_results.py to get search results page to work	Zachary Sloan
2013-01-31	Added wqflask-nginx.conf	Zachary Sloan
2013-01-31	Copied over nginx.conf from /etc/nginx	Zachary Sloan
2013-01-31	Merge branch 'flask' of https://github.com/zsloan/genenetwork into flask	Zachary Sloan
2013-01-31	Changed reference to 'dataset_name' in keywords to 'dataset' to get	Zachary Sloan
2013-01-31	Changed fd to kw in search_results.py, commented out some lines	Zachary Sloan
2013-01-25	Fixed a few bugs while trying to get the code running on the new server	Zachary Sloan
2013-01-22	Pushed through a few errors in getting the correlation page running	Zachary Sloan
2013-01-18	Renamed CorrelationPage.py to show_corr_results.py	Zachary Sloan
2013-01-12	Commented out a couple things in requirements.txt to get pip	Zachary Sloan
2013-01-11	Commented out import of rpy2 in correlationFunction.py due to	Zachary Sloan
2013-01-11	Upgraded packages requirements.txt but haven't tested	Zachary Sloan
2013-01-11	Overwrote requirements.txt	Zachary Sloan
2013-01-11	Trimmed a bunch of code off of marker_regression.py	Zachary Sloan
2013-01-10	Checking in before we try to write our own code for the manhattan	Zachary Sloan
2013-01-10	Checking in before trying to put manhattan plot sections closer together	Zachary Sloan
2013-01-10	Normalized the y axis for each manhattan plot section	Zachary Sloan
2013-01-10	The plots now correctly appear above/below each other.	Zachary Sloan
2013-01-10	Edited marker_regression.coffee to make every sub-manhattan plot	Zachary Sloan
2013-01-10	Made Chromosome class in marker_regression.coffee; current	Zachary Sloan
2013-01-10	Made x-axis values into ints; committing before trying to add multiple graphs	Zachary Sloan
2013-01-10	Worked with the manhattan plot coffeescript to set x-axis and change	Zachary Sloan
2013-01-09	Manhattan plot results are appearing correctly for chromosome 1	Zachary Sloan
2013-01-09	The histogram coffeescript is now in its own class and the graph	Zachary Sloan
2013-01-09	Checking in before putting the histogram coffeescript into its own	Zachary Sloan
2013-01-09	More or less finished the permutation histogram	Zachary Sloan
2013-01-09	Got the permutation plot working as a line plot; still need to make	Zachary Sloan
2013-01-09	jqplot added	Zachary Sloan
2013-01-09	Got the marker regression page to display again	Zachary Sloan
2013-01-08	js_data is being printed out (seemingly) correctly now for the	Zachary Sloan
2013-01-08	Created IndChromosome class in species.py and wrote functions for	Zachary Sloan
2013-01-08	Deleted some unnecessary code in marker_regression.py and fixed some bugs	Zachary Sloan
2013-01-04	Continued rewriting marker_regression.py code	Zachary Sloan
2013-01-04	Correct results are being returned from reaper for the marker regression page	Zachary Sloan