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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
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feature/search-history
feature/textfile-generator
gn-master
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hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
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stable
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GeneNetwork (2nd generation)
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Author
2013-03-28
Committing before putting quick_search_table code in classes
Zachary Sloan
2013-03-27
Got quick_search_table.py to a point where it runs; will
Zachary Sloan
2013-03-27
Worked on trying to get results for quick search to display
Zachary Sloan
2013-03-26
Continued working on quick_search_table.py, which now gets
Zachary Sloan
2013-03-26
Created quick_search_table.py to create table with all of the
Zachary Sloan
2013-03-26
Just checking in code while in the process of trying to get
Zachary Sloan
2013-03-22
Began creating templates for login/registration
Zachary Sloan
2013-03-22
Added secure_server.py
Zachary Sloan
2013-03-22
Removed zach_settings.py from git tracking
Zachary Sloan
2013-03-21
Did some work towards getting Nick's code working with our plink
Zachary Sloan
2013-03-19
In the process of trying to use Nick's pylmmKinship.py code to
Zachary Sloan
2013-03-19
Added Nick's input.py file which uses plink .ped files as input
Zachary Sloan
2013-03-19
Searches work for the full access human datasets with mRNA assay
Zachary Sloan
2013-03-15
Began work with implementing general search
Zachary Sloan
2013-03-15
Changes related to searching for selected points in marker regression plot
Zachary Sloan
2013-03-13
Merge branch 'flask' of http://github.com/zsloan/genenetwork into flask
Zachary Sloan
2013-03-13
Added some to notes
Zachary Sloan
2013-03-12
Added the script generating probesetfreeze data matrix files
Zachary Sloan
2013-03-12
Highlighting points works in Firefox but still doesn't work in chrome
Zachary Sloan
2013-03-12
Got cashing working with pickle
Zachary Sloan
2013-03-09
Trying to get caching working with pickle now
Zachary Sloan
2013-03-08
Caching is working for marker regression but really slowly
Zachary Sloan
2013-03-08
Refactored GWAS function in lmm.py
Zachary Sloan
2013-03-07
Progress bar is now completely working
Zachary Sloan
2013-03-07
Have first 45% of progress bar working
Zachary Sloan
2013-03-07
Created file temp_data to store data related to progress
Zachary Sloan
2013-03-06
Stored percent of calculate_kinship function completion in
Zachary Sloan
2013-03-06
Improved positioning/size of copy/print/save buttons for
Zachary Sloan
2013-03-05
Implemented DataTables; there are now options to download the marker
Zachary Sloan
2013-03-02
Created generate_probesetfreeze_file to create the
Zachary Sloan
2013-02-28
Updated benchmark.py to aggregate run times when you run the
Zachary Sloan
2013-02-28
Added benchmark.py that compares the time of various operations
Zachary Sloan
2013-02-28
Chromosome labels on marker regression plot are centered
Zachary Sloan
2013-02-23
A static progress bar now displays when loading the marker regression results
Zachary Sloan
2013-02-22
Added some to notes
Zachary Sloan
2013-02-21
Added underscore.js
Zachary Sloan
2013-02-21
Add my_pylmm package
Zachary Sloan
2013-02-21
Plot points and chromosome lines are now correct
Zachary Sloan
2013-02-20
Did more work with manhattan plot, trying to fix a small issue
Zachary Sloan
2013-02-20
Created y-axis
Zachary Sloan
2013-02-19
Manhattan plot and chromosome lines are all correct now
Zachary Sloan
2013-02-19
Made lines for manhattan plot proportional to chromosome lengths
Zachary Sloan
2013-02-15
Points are labeled with marker names and hovering causes the LRS
Zachary Sloan
2013-02-15
Made it to where hovering over a point in the manhattan plot changes
Zachary Sloan
2013-02-15
Created lines in marker regression scatter plot separating
Zachary Sloan
2013-02-14
Put coffeescript code for manhattan plot into a class/functions
Zachary Sloan
2013-02-14
Have marker regression results displaying as a scatterplot (just the points)
Zachary Sloan
2013-02-13
Got results displaying for BXD and fixed genofile_parser.py to work
Zachary Sloan
2013-02-13
Got results for marker regression page displaying in table
Zachary Sloan
2013-02-13
Fixed some bugs related to getting the marker regression page working
Zachary Sloan
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