Age | Commit message (Collapse) | Author | |
---|---|---|---|
2015-03-05 | Removed execution flag x from files | Pjotr Prins | |
2015-03-03 | fix print | Pjotr Prins | |
2015-03-01 | Warning | Pjotr Prins | |
2015-03-01 | Add warning to running lmm.py from the command line | Pjotr Prins | |
2015-02-28 | Started adaptations for introducing multi-core version | Pjotr Prins | |
2015-02-20 | Splitting out handlers | Pjotr Prins | |
2015-02-20 | Moved pylmm scripts that are not used by GN2 | Pjotr Prins | |
2015-02-20 | Remove empty dir | Pjotr Prins | |
2015-02-20 | Split out behaviour for calling lmm from GN2 or (testing) CLI | Pjotr Prins | |
2015-02-11 | Added pop-up for empty searches | Zachary Sloan | |
Replaced pyLMM code with one version of Pyotr's updated faster code Began fixing search to work for combined searches Made login screen look better and fixed for empty fields | |||
2015-01-30 | Fixed several bugs | Zachary Sloan | |
Added legend to bar chart color by trait function Added scatterplot matrix figure Fixed database timeout problem | |||
2014-12-29 | Made a bunch of cosmetic changes to various pages and fixed a couple searches | Zachary Sloan | |
2014-12-12 | Added a additive effect column to search result and collection tables | Zachary Sloan | |
Fixed the header so that it looks fine when resizing | |||
2014-12-11 | Fixed some weirdness with the navbar and jumbotron and aligned everything | Zachary Sloan | |
to the left | |||
2014-12-04 | Added some pages for anonymous collections | Zachary Sloan | |
2014-12-04 | Committing changes to css that change header color | Zachary Sloan | |
2014-12-01 | Merge /home/lei/gene | Zachary Sloan | |
2014-12-01 | Changed header appearances | Zachary Sloan | |
Partially implemented PCA feature to correlation matrix page | |||
2014-12-01 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-11-17 | Just more changes converting to bootstrap 3 | Zachary Sloan | |
2014-11-06 | Upgraded to bootstrap 3 and updated a lot of html to reflect this | Zachary Sloan | |
2014-11-05 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-11-04 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-10-29 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-10-29 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-10-29 | Merge /home/gn2/gene | Lei Yan | |
2014-10-24 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-10-24 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-10-17 | Merge /home/zas1024/gene | Zachary Sloan | |
2014-10-17 | Added reference, policies, and links pages | Zachary Sloan | |
Improved the appearance of the header menu and "title bar" | |||
2014-10-09 | Merge /home/zas1024/gene | Zachary Sloan | |
2014-10-09 | Added config file | Zachary Sloan | |
2014-10-09 | Fixed error with loading the trait page for phenotype traits | Zachary Sloan | |
2014-10-02 | Fixed an error when there's no locus for mRNA expression traits | Zachary Sloan | |
2014-09-29 | Found the problem that was causing several collections functions to not work | Zachary Sloan | |
and fixed it | |||
2014-09-22 | Adding the port as a parameter to runserver; this should just be temporary until | Zachary Sloan | |
I figure out how to get it to read the port from the config file instead Using runserver.py instead of secure_server.py because of an error with the latter that I haven't figured out how to fix yet Improved the appearance of several of the tables | |||
2014-08-28 | Added a validation that warns the user of the number of permutations for | Zachary Sloan | |
pyLMM is more than 20 (due to speed) Changed the port in the flask settings to 5002 due to adding the new production server branch | |||
2014-08-25 | Merge /home/lei/gene | Zachary Sloan | |
2014-08-25 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-08-25 | Merge /home/lei/gene | Zachary Sloan | |
2014-08-25 | Added permutations to pyLMM | Zachary Sloan | |
2014-08-21 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-08-21 | Committer: Lei Yan <lei@penguin.uthsc.edu> | Lei Yan | |
On branch master | |||
2014-08-21 | Added the option to display mapping results as either an interval mapping | Zachary Sloan | |
or manhattan plot Fixed a few minor bugs | |||
2014-08-15 | Permutations now work with rqtl | Zachary Sloan | |
2014-08-12 | Fixed the scrollable data tables for the show trait page | Zachary Sloan | |
Added the option to display the rqtl results (and soon other mapping results) as either a manhattan plot or "interval map" style curve chart Removed a couple unnecessary javascript imports Changed the function in helper_functions.py that creates the trait and dataset objects, making it to where the trait object also gets qtl info Fixed color by trait after it was broken by the "scatterplot matrix" function | |||
2014-08-04 | Fixed another minor issue with the heatmap where the original curve wouldn't ↵ | Zachary Sloan | |
be removed | |||
2014-08-04 | Fixed a problem with the heatmap after moving reorgLodData function to ↵ | Zachary Sloan | |
panelutils.js Got rqtl working with converted BXD genofile and also got composite mapping working | |||
2014-07-25 | Got the heatmap/lodchart combo working | Zachary Sloan | |
Started working on getting rqtl working as another mapping method | |||
2014-07-21 | Fixed issue where sample values were ordered on the trait page | Zachary Sloan | |