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Author
2015-03-17
GWAS: one result is missing
Pjotr Prins
2015-03-17
lmm1: fixed a few regressions introduced while debugging
Pjotr Prins
2015-03-17
lmm.py: bring to original state
Pjotr Prins
2015-03-17
GWAS multi-core: Tweak queue
Pjotr Prins
2015-03-16
GWAS: results get returned
Pjotr Prins
2015-03-16
Adding GWAS code
Pjotr Prins
2015-03-16
Adding multi-core GWAS
Pjotr Prins
2015-03-16
Output added
Pjotr Prins
2015-03-16
Refactoring eigenvalue KvaKve
Pjotr Prins
2015-03-15
Comment
Pjotr Prins
2015-03-15
A little cleanup
Pjotr Prins
2015-03-15
Added multi-core kinship support
Pjotr Prins
2015-03-14
Threading: Sleep while waiting
Pjotr Prins
2015-03-14
Allow the GC to do its job
Pjotr Prins
2015-03-14
Allow queue to be 2xCPU. Disable output files
Pjotr Prins
2015-03-14
Kinship multi-core: don't overload the queue with jobs
Pjotr Prins
2015-03-14
Parallel K calculation is fixed
Pjotr Prins
2015-03-14
Tests and indentation
Pjotr Prins
2015-03-14
Conditional run of K calculation
Pjotr Prins
2015-03-14
Adding tests
Pjotr Prins
2015-03-14
Adding assertions
Pjotr Prins
2015-03-14
Allow empty K to be passed in
Pjotr Prins
2015-03-14
Removing all references to is_testing
Pjotr Prins
2015-03-14
Working on kinship: GN2 and simple matrix multiplicatino agree
Pjotr Prins
2015-03-14
More MAF
Pjotr Prins
2015-03-14
Replace missing values with MAF
Pjotr Prins
2015-03-14
Testing kinship works on small G
Pjotr Prins
2015-03-14
Merge branch 'zsloan' into dev
Pjotr Prins
2015-03-14
kinship: working on pylmm
Pjotr Prins
2015-03-13
runlmm.py: remove extraneous conversion
Pjotr Prins
2015-03-13
& Refactoring
Pjotr Prins
2015-03-13
& runlmm.py: added assertions for default run
Pjotr Prins
2015-03-12
lmm: use deep-copy to avoid side-effects
Pjotr Prins
2015-03-12
weird fix for lmm result - Python weirdness
Pjotr Prins
2015-03-12
Check G
Pjotr Prins
2015-03-12
Debug info
Pjotr Prins
2015-03-12
process_plink.py: remove unused file
Pjotr Prins
2015-03-12
Combined searches now work for most terms
Zachary Sloan
2015-03-12
Just committing changes to search so I can pull to production branch
Zachary Sloan
2015-03-11
runlmm.py: message
Pjotr Prins
2015-03-11
Adding multi-core kinship.py
Pjotr Prins
2015-03-11
lmm.py: change message on running from CLI
Pjotr Prins
2015-03-11
& Added testing option, now the results match
Pjotr Prins
2015-03-10
Normalisation
Pjotr Prins
2015-03-10
lmm.py: debugging output
Pjotr Prins
2015-03-10
Missing genotypes and normalize
Pjotr Prins
2015-03-10
Populationg Redis from TSV data
Pjotr Prins
2015-03-10
Refactored tsvreader out
Pjotr Prins
2015-03-10
Factoring out tsvreaders
Pjotr Prins
2015-03-10
convertlmm.py: add SNP names
Pjotr Prins
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