| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2020-12-02 | Made changes that should fix Heatmap errors + removed a console.log in ↵ | zsloan | |
| panelutil.js | |||
| 2020-11-25 | Merge pull request #489 from Alexanderlacuna/fix-references | BonfaceKilz | |
| Fix broken UI | |||
| 2020-11-24 | solve issues to do with decoding in python3 | Alexander Kabui | |
| 2020-11-23 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2020-11-23 | Changed correlation matrix cells for traits with zero shared samples to ↵ | zsloan | |
| instead say N/A and be a shade of grey | |||
| 2020-11-20 | Replace mockobject with dataclasses | BonfaceKilz | |
| * wqflask/tests/unit/wqflask/test_markdown_routes.py (MockRequests404): Use dataclasses. (MockRequests200): Ditto. | |||
| 2020-11-20 | Update tests to use new gn2-docs url | BonfaceKilz | |
| 2020-11-20 | Replace mistunes with markdown library | BonfaceKilz | |
| * wqflask/wqflask/markdown_routes.py (render_markdown): Use markdown library instead of mistunes. | |||
| 2020-11-20 | Point url for fetching md content to gn-docs repo | BonfaceKilz | |
| * wqflask/wqflask/markdown_routes.py (render_markdown): Use gn-docs URL to fetch markdown content. | |||
| 2020-11-20 | Remove glossary markdown template | BonfaceKilz | |
| * wqflask/wqflask/static/markdown/: Delete folder. Files moved to https://github.com/genenetwork/gn-docs | |||
| 2020-11-19 | Removed lines that check that all traits are part of the same group, | zsloan | |
| since it might be the case in the future that different groups still share sample names (and it's not really necessary since we check how many samples are shraed between each individual pair of traits) | |||
| 2020-11-18 | Fixed issue where the cofactor trait descriptions didn't work correctly | zsloan | |
| for genotype/snp cofactors (the code previously only accounted for probeset/phenotype cofactors, so it was treating genotypes/snps like phenotype traits) | |||
| 2020-11-18 | Changed default Low/High colors for the correlation scatterplot cofactor | zsloan | |
| coloring to Blue/Red respectively (was originally Light Grey/Black) | |||
| 2020-11-18 | Added some jquery closing the "Add To Collection" colorbox window after | zsloan | |
| its form is submitted | |||
| 2020-11-18 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2020-11-18 | Fixed issue that was causing scatterplot cofactors to not work if the | zsloan | |
| cofactors were genotypes (because it tried to get the "description_display" which doesn't exist for genotype traits) | |||
| 2020-11-18 | Removed console.log and commented out statements from | zsloan | |
| get_traits_from_collection.js | |||
| 2020-11-18 | Fixed "back_to_collections" function in get_traits_from_collection.js | zsloan | |
| (function that lets you return from viewing a collection to viewing the list of collections when selecting cofactors for scatterplot) | |||
| 2020-11-18 | Merge pull request #481 from Alexanderlacuna/test-SampleList | BonfaceKilz | |
| Test sample list | |||
| 2020-11-16 | update refactored natural_sort function in show_trait/SampleList.py | Alexanderlacuna | |
| 2020-11-12 | Import fontawesome css/js and used its info character for glossary links on ↵ | zsloan | |
| search results page | |||
| 2020-11-12 | Substituted -log(p) with -logP as mentioned in Rob's e-mail | zsloan | |
| 2020-11-12 | Show Mb positions to 6 decimal places in mapping results table | zsloan | |
| 2020-11-11 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2020-11-11 | Added Bonface to the footer | zsloan | |
| 2020-11-11 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into ↵ | BonfaceKilz | |
| feature/add-glossary-page | |||
| 2020-11-11 | Update image width | BonfaceKilz | |
| 2020-11-11 | Add basic markdown styling | BonfaceKilz | |
| * wqflask/wqflask/static/new/css/markdown.css: New file. * wqflask/wqflask/templates/glossary.html: add markdown id to markdown container. | |||
| 2020-11-10 | Changed logic for creating temp trait SampleList to account for both traits ↵ | zsloan | |
| encoded as bytes and traits encoded as strings, since temp traits created before and after the Python 3 switchover will have different encoding | |||
| 2020-11-10 | Fixed issue where strain values in bytes needed to be decoded when loading a ↵ | zsloan | |
| Temp trait | |||
| 2020-11-10 | Changed "BXD-Harvested" to "BXD-Longevity" since that group was renamed and ↵ | zsloan | |
| using the wrong name was causing correlations to not work. | |||
| 2020-11-10 | Add missing links and some markdown formatting(underline, bold) | BonfaceKilz | |
| * wqflask/wqflask/static/markdown/glossary.md: Update file. | |||
| 2020-11-06 | Removed the page selection from the top of the table because it created an ↵ | zsloan | |
| awkward gap between the column show/hide buttons and the table, and this table will be changed to use Scroller instead of paging soon regardless | |||
| 2020-11-06 | Changed the show/hide column buttons to use DataTables API + a few other ↵ | zsloan | |
| changes (for some reason none of my changes could be pushed from one of my local branches to origin/testing, so they're combined in this commit) - Fixed a couple column header glossary links to point to GN1 - Added trait_list.css for styling a couple elements common to similar pages (like correlations or view collection) | |||
| 2020-11-06 | Added min-width for the divs containing the analysis tools and table ↵ | zsloan | |
| options, since they would look weird if the window shrunk below a certain width Also made some indentation more consistent | |||
| 2020-11-06 | Added new css file for pages that have trait list tables (not sure what else ↵ | zsloan | |
| to call them, but pages like search results, view collection, and correlation results) | |||
| 2020-11-06 | Increased the min-width for the show_trait page container div for all the ↵ | zsloan | |
| accordion sections, since previously it could get too narrow and cause text to extend beyong the borders of each accordion area | |||
| 2020-11-06 | After I changed some class names in the trait page to use - instead of _ (to ↵ | zsloan | |
| keep naming consistent) I forgot to change the references in show_trait_mapping_tools.js (which broke the functionality of clicking a tab doing mapping) | |||
| 2020-11-06 | remove whitespace | Alexanderlacuna | |
| 2020-11-06 | modify natural_sort and return list to avoid having side effect | Alexanderlacuna | |
| 2020-11-06 | modify tests to for changes in the natural sort function | Alexanderlacuna | |
| 2020-11-06 | fix typo | Alexanderlacuna | |
| 2020-11-05 | remove duplicates | Alexanderlacuna | |
| 2020-11-05 | add test for samplelist and show_trait | Alexanderlacuna | |
| 2020-11-04 | Changed numeric-html sorting for the Tissue/Lit r columns to ↵ | zsloan | |
| natural-minus-na so it deals with the "--" values * wqflask/wqflask/templates/correlation_page.html - Replaced numeric-html sorting with natural-minus-na for the lit/tissue r columns | |||
| 2020-11-04 | Use new glossary link from glossary_blueprint in html templates | BonfaceKilz | |
| 2020-11-04 | Add missing image | BonfaceKilz | |
| 2020-11-04 | Add link markers to elements which are referenced from elsewhere | BonfaceKilz | |
| 2020-11-04 | Update test_markdown_routes | BonfaceKilz | |
| * wqflask/tests/unit/wqflask/test_markdown_routes.py (test_render_markdown_when_fetching_locally): Fix failing test. | |||
| 2020-11-04 | Add an edit link button to glossary page | BonfaceKilz | |
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