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2018-03-26- Disabled PYTHONPATH injection - fix Guix instead, see https://github.com/pj...Pjotr Prins
2018-03-26Check that key exists before using itMuriithi Frederick Muriuki
2018-03-26Provide connections to elasticsearchMuriithi Frederick Muriuki
2018-03-26Fix assumption of existing collectionMuriithi Frederick Muriuki
2018-03-26Add more login tests.Muriithi Frederick Muriuki
2018-03-26Added unittest examplePjotr Prins
2018-03-26Fixing authentication stuff so it uses parameters properly. Also no PYTHONPAT...Pjotr Prins
2018-03-26Add tests for Registration process.Muriithi Frederick Muriuki
2018-03-26Update module to make it more testableMuriithi Frederick Muriuki
2018-03-26Check elasticsearch at point of useMuriithi Frederick Muriuki
2018-03-26Add check for elasticsearchMuriithi Frederick Muriuki
2018-03-26Add code to allow user to change passwordMuriithi Frederick Muriuki
2018-03-26Refactor common items to more generic methods.Muriithi Frederick Muriuki
2018-03-26Send emails for forgotten passwordsMuriithi Frederick Muriuki
2018-03-26Add SMTP configuration variablesMuriithi Frederick Muriuki
2018-03-26Fail safely if elasticsearch is down or unconfiguredMuriithi Frederick Muriuki
2018-03-26Set to None if no value providedMuriithi Frederick Muriuki
2018-03-26Use elasticsearch rather than mysql for local accountsMuriithi Frederick Muriuki
2018-03-26Add OAuth2 login code for ORCIDMuriithi Frederick Muriuki
2018-03-26Update configurationsMuriithi Frederick Muriuki
2018-03-26Add code to enable OAuth2 loginMuriithi Frederick Muriuki
2018-03-26Delay after save for indexingMuriithi Frederick Muriuki
2018-03-26Add more configuration variables.Muriithi Frederick Muriuki
2018-03-26Add save_user() functionMuriithi Frederick Muriuki
2018-03-26Add functions to help handle github loginMuriithi Frederick Muriuki
2018-03-26Add elasticsearch_tools moduleMuriithi Frederick Muriuki
2018-03-26Add client_id and client_secret configurationsMuriithi Frederick Muriuki
2018-03-26Add template elements for OAuth loginMuriithi Frederick Muriuki
2018-03-26Add configuration variables for external servicesMuriithi Frederick Muriuki
2018-03-16Just undoing tabulator changes so I can push other changeszsloan
2018-03-15Changed appearance of mapping and correlation options on trait pagezsloan
2018-03-02Added option to display selected covariates for GEMMA mappingzsloan
2018-02-26Merge /home/lei/gene into testingzsloan
2018-02-26Committing some in-progress changes related to loading correlation page from ...zsloan
2018-02-23update corr scatterplot interfaceLei Yan
2018-02-14Added empty collection error page to git, since it wasn't on productionzsloan
2018-02-13Resolved conflictzsloan
2018-02-13Just committing very minor change to correlation table so I can pull other ch...zsloan
2018-02-13@zsloan: we should introduce full parameter checking and sensible defaults fo...Pjotr Prins
2018-02-12Changed code parsing GEMMA output to fix issue where it wasn't getting the co...zsloan
2018-02-12Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2018-02-12Quick parallel correlation should work, though I'm not sure why the code sudd...zsloan
2018-02-10Fixing GEMMA LOCOPjotr Prins
2018-02-10Fixed finding PATHs - one return statement!Pjotr Prins
2018-02-10Check for bimbam path and bail out if it is missingPjotr Prins
2018-01-30gunicorn dev and prod modes addedPjotr Prins
2018-01-29Gunicorn worksPjotr Prins
2018-01-29startup script: adapting for gunicornPjotr Prins
2018-01-24Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2018-01-24Added links for markers in mapping results table when genotypes exist in DBzsloan
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