index
:
genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
wqflask
/
wqflask
/
my_pylmm
Age
Commit message (
Expand
)
Author
2016-01-26
Removed a bunch of files/directories/packages that are no longer used and som...
zsloan
2015-11-09
Fixed issue that caused mapping to not work; for some reason the path to pylm...
zsloan
2015-07-10
Fixed the genofile_parser.py script since some .geno files had been incorrect...
zsloan
2015-05-11
pylmm has moved out of the GN2 source tree to https://github.com/genenetwork/...
pjotrp
2015-04-19
pylmm: Release
Pjotr Prins
2015-04-19
pylmm: can now be called from GN2 without path set
Pjotr Prins
2015-04-19
pylmm: auto add to pythonpath
Pjotr Prins
2015-04-19
pylmm: move temp_data local
Pjotr Prins
2015-04-19
pylmm: module loading
Pjotr Prins
2015-04-19
pylmm: Copied benchmark (preparing for a module)
Pjotr Prins
2015-04-19
pylmm: Edit conflict
Pjotr Prins
2015-04-19
INSTALL info
Pjotr Prins
2015-04-18
Fix NA to float tranforms
Pjotr Prins
2015-04-18
pylmm: fix integration problems
Pjotr Prins
2015-04-18
pylmm: fix integration problems
Pjotr Prins
2015-04-18
Use reduced outputter for GN2 logs too
Pjotr Prins
2015-04-17
Merge branch 'lmm' of github.com:pjotrp/genenetwork2 into lmm
Pjotr Prins
2015-04-17
Merge branch 'master' into lmm
Pjotr Prins
2015-04-13
Merge branch 'lmm' of github.com:pjotrp/genenetwork2 into lmm
Pjotr Prins
2015-04-13
Added examples for convertlmm.py
Pjotr Prins
2015-04-13
Improved assertion message
Pjotr Prins
2015-04-06
Just committing a couple minor bug fixes to get code working after pulling Pj...
zsloan
2015-04-04
Regression tests
Pjotr Prins
2015-04-04
Fixing transpose issues
Pjotr Prins
2015-04-04
Run works without transposes
Pjotr Prins
2015-04-04
Consolidate tests now they all agree for redis, redis_new and run
Pjotr Prins
2015-04-03
- Calculate n,m from the start
Pjotr Prins
2015-04-03
Rename gwas_using_redis to gwas_with_redis
Pjotr Prins
2015-04-03
temp_data is no longer passed around
Pjotr Prins
2015-04-03
Refactoring Redis use to one function
Pjotr Prins
2015-04-03
Passing in an iterator
Pjotr Prins
2015-04-03
Refactoring GN2 interface
Pjotr Prins
2015-04-02
Passing in an iterator
Pjotr Prins
2015-04-02
Prepare iterator
Pjotr Prins
2015-04-02
Create test geno iterator
Pjotr Prins
2015-04-02
Release 0.50-gn2
Pjotr Prins
2015-04-02
Make the new version of genotype normalization default
Pjotr Prins
2015-03-30
Refactoring genotype normalization
Pjotr Prins
2015-03-30
Use of is vs == when testing None
Pjotr Prins
2015-03-30
Percentage complete: Add method description
Pjotr Prins
2015-03-30
Merge branch 'master' into lmm
Pjotr Prins
2015-03-30
Merge with zsloan master
Pjotr Prins
2015-03-23
Minor update to get the pylmm code working on my instance of penguin
DannyArends
2015-03-23
Adding my path to sys.path in pylmm
DannyArends
2015-03-20
Fall back on calculate_kinship_new again
Pjotr Prins
2015-03-20
Trying to get kinship_old back in lmm1
Pjotr Prins
2015-03-18
Merge branch 'pylmm0002'
Pjotr Prins
2015-03-18
Tagging 0.50-gn2-pre2
Pjotr Prins
2015-03-18
Add uses debug
Pjotr Prins
2015-03-18
Aligned gn2 handlers with standalone
Pjotr Prins
[next]