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AgeCommit message (Expand)Author
2016-06-21log: replace print statementsPjotr Prins
2016-06-21logger: add format field (reserve)Pjotr Prins
2016-06-21Use logger also for benchmarkingPjotr Prins
2016-06-21Logger: switch for logging SQLALCHEMYPjotr Prins
2016-06-21Benchmarking: allow output select with LOG_BENCHPjotr Prins
2016-06-21Logger: SQLPjotr Prins
2016-06-19gn_server: Species info can be fetched from gn_serverPjotr Prins
2016-06-19gn_server: SQL handlingPjotr Prins
2016-06-19Logger: started logging SQLPjotr Prins
2016-06-19logger: adding functionality for SQL•••views.py: simplified code Pjotr Prins
2016-06-19Renamed settings so they are grouped togetherPjotr Prins
2016-06-18Logger: changed levelPjotr Prins
2016-06-18Logger: create stub so we can have multiple arguments to log functionsPjotr Prins
2016-06-18Logging settingsPjotr Prins
2016-06-18Documented loggerPjotr Prins
2016-06-18Logger: more infoPjotr Prins
2016-06-18Logger: introducing loggingPjotr Prins
2016-06-18Logging: behavioursPjotr Prins
2016-06-18Logger: improving outputPjotr Prins
2016-06-18Changed file permssions to non-executablePjotr Prins
2016-06-18Disable setting sys.pathsPjotr Prins
2016-06-18Logger: introducing loggingPjotr Prins
2016-06-17ConflictPjotr Prins
2016-06-17Removed trailing spaces in .py and .js filesPjotr Prins
2016-06-16Introduce behaviour parameters to facilitate developmentPjotr Prins
2016-05-17Merge branch 'staging' of github.com:genenetwork/genenetwork2zsloan
2016-05-10Correlation successfully uses materialized views and parallel processing, but...•••Changed order of mapping options to display Interval Mapping first Changed some links to no longer open in new tab/window zsloan
2016-04-20A few fixes to get the webserver running againPjotr Prins
2016-04-20Parsing the names of the individuals, and coding H as -999DannyArends
2016-04-20Adding the geno file parser from ZachDannyArends
2016-04-20Show error when GENODIR is missingPjotr Prins
2016-04-20external program should fail on return value not zeropjotrp
2016-04-20Minor fixespjotrp
2016-04-20[PATCH 042/100] Sanitizing locationsPjotr Prins
2016-04-20[PATCH 041/100] Fixes for running toolsPjotr Prins
2016-04-20-a•••[PATCH 038/100] Fix compile errors Pjotr Prins
2016-04-20[PATCH 037/100] WebQtlConfig: sanitizing naming and used varsPjotr Prins
2016-04-20Settled on the _COMMAND syntax over _RUNpjotrp
2016-04-20[PATCH 033/100] Refactored file searchingPjotr Prins
2016-04-20Fine tuning file locatingpjotrp
2016-04-20tools.py: add function locate_without_errorpjotrp
2016-04-20[PATCH 027/100] Introduce tools.locatePjotr Prins
2016-04-20[PATCH 026/100] Introducing cached values PYLMM_COMMAND,••• GEMMA_COMMAND, PLINK_COMMAND and TEMPDIR Pjotr Prins
2016-04-20Introducing TEMPDIRpjotrp
2016-04-20[PATCH 024/100] Sanitizing file handlingPjotr Prins
2016-04-20[PATCH 023/100] WIP fixing all pathsPjotr Prins
2016-04-20[PATCH 018/100] Find external tools: refactored code to work with GNU GuixPjotr Prins
2016-04-07SNP Track option should now work for GN1 mapping figure•••Fixed typo in show_trait html that caused the p-value slider to not work for correlations zsloan
2016-04-06Permutations (suggestive/significant lines, legend, and histogram) should now...•••Changed the logic for receiving permutation/bootstrap info when loading mapping page in different ways (from show_trait, from remapping, from clicking single chromosome) Added text below figure when Allele Effects selected/relevant zsloan
2015-11-09Fixed issue that caused mapping to not work; for some reason the path to pylm...zsloan
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