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2016-04-20[PATCH 037/100] WebQtlConfig: sanitizing naming and used varsPjotr Prins
2016-04-20Settled on the _COMMAND syntax over _RUNpjotrp
2016-04-20[PATCH 033/100] Refactored file searchingPjotr Prins
2016-04-20Fine tuning file locatingpjotrp
2016-04-20tools.py: add function locate_without_errorpjotrp
2016-04-20[PATCH 027/100] Introduce tools.locatePjotr Prins
2016-04-20[PATCH 026/100] Introducing cached values PYLMM_COMMAND,Pjotr Prins
2016-04-20Introducing TEMPDIRpjotrp
2016-04-20[PATCH 024/100] Sanitizing file handlingPjotr Prins
2016-04-20[PATCH 023/100] WIP fixing all pathsPjotr Prins
2016-04-20[PATCH 018/100] Find external tools: refactored code to work with GNU GuixPjotr Prins
2016-04-07SNP Track option should now work for GN1 mapping figurezsloan
2016-04-06Permutations (suggestive/significant lines, legend, and histogram) should now...zsloan
2015-11-09Fixed issue that caused mapping to not work; for some reason the path to pylm...zsloan
2015-07-09Mapping methods now check for existing genotype files.zsloan
2015-06-29Merge pull request #72 from lomereiter/issue69zsloan
2015-06-29Merge pull request #77 from lomereiter/fix_sqlzsloan
2015-06-26Fixed bug where mapping results sometimes wouldn't display. This would occurzsloan
2015-06-18removed unused functionArtem Tarasov
2015-06-18add missing line to webqtlUtilArtem Tarasov
2015-05-12Add info to warningpjotrp
2015-05-12More elaborate handling of finding pylmmPjotr Prins
2015-05-12Move path search into tools.pypjotrp
2015-05-11Moving pylmm out of the treepjotrp
2014-08-12Fixed the scrollable data tables for the show trait pageZachary Sloan
2014-07-18Added outlier highlightingZachary Sloan
2014-05-05Committing a bunch of changes related to integrating GEMMA andZachary Sloan
2014-02-27Began working on a TraitCollection.py file that will contain both theZachary Sloan
2013-10-17Sample objects are now passed to js_data for drawing the correlationLei Yan
2013-10-11Merge /home/sam/geneLei Yan
2013-10-07Worked on logins, session_ids, flash messages, etc.Sam
2013-09-13Merge https://github.com/zsloan/genenetworkLei Yan
2013-07-19Finished integrating code that reads sample list from geno filesZachary Sloan
2013-07-12Rewrote code related to getting the tissue correlation column to displayLei Yan
2013-06-20Added file corr_result_helpers.py that includes the function thatZachary Sloan
2013-06-19Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flaskZachary Sloan
2013-06-13Fixed issue where too much memory was used as a result of creating aLei Yan
2013-05-23Lots of changes around usersSam
2013-04-23Created file correlation_plot.py for the correlation scatterplotZachary Sloan
2013-04-18The plink_input is split into chunks that are stored in temp_data, butZachary Sloan
2013-04-17Created file with pickled SNPIterator (from input.py) dataZachary Sloan
2013-04-05Loading bar now correctly shows the time to completionZachary Sloan
2013-03-12Got cashing working with pickleZachary Sloan
2013-03-07Have first 45% of progress bar workingZachary Sloan
2013-03-07Created file temp_data to store data related to progressZachary Sloan
2013-02-28Updated benchmark.py to aggregate run times when you run theZachary Sloan
2013-02-28Added benchmark.py that compares the time of various operationsZachary Sloan
2013-02-19Made lines for manhattan plot proportional to chromosome lengthsZachary Sloan
2013-01-31Changed reference to 'dataset_name' in keywords to 'dataset' to getZachary Sloan
2013-01-22Pushed through a few errors in getting the correlation page runningZachary Sloan
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