genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Collapse)	Author
2021-10-25	Mark `get_resource_info` as deprecated	BonfaceKilz

2021-10-04	Changed get_user_groups to pull both the ID and details in the for loop from ↵	zsloan
	group_list by using group_list.items()
2021-09-10	Removed encoding, since it's apparently not needed since the Python 3 ↵	zsloan
	switchover (and was causing there to be no matches between user IDs and groups)
2021-06-15	Fix issue where column values were used as str instead of bytes; pretty sure ↵	zsloan
	this was introduced by Python3
2021-04-30	autopep8: Fix E501	BonfaceKilz

2021-03-16	Fixed encoding in load_json_from_redis to account for the first that column ↵	zsloan
	values are sometimes stored as bytes and sometimes as strings
2021-03-16	Fixed encoding to make get_user_groups work properly, since the user IDs for ↵	zsloan
	groups in Redis are stored as strings
2021-02-18	Remove the deocde since it was throwing an error	zsloan

2021-02-17	Fixed error caused by user IDs being encoded as bytes	zsloan

2020-11-02	Created function for encoding the column value as bytes when fetching from ↵	zsloan
	the JSON-formatted string pulled from Redis (since this was needed after the Python 3 switchover) * wqflask/utility/redis_tools.py - Created function load_json_from_redis that encodes the key (column_value) when fetching a value from the JSON pulled from Redis
2020-09-26	Merge branch 'testing' into build/python3-migration	BonfaceKilz

2020-09-18	Apply pep8 formatting	BonfaceKilz

2020-09-17	Merge branch 'testing' into build/python3-migration	BonfaceKilz

2020-08-31	Fixed issue that was causing updating resource default privileges to not	zsloan
	work * wqflask/utility/redis_tools.py - There was an issue where resources wouldn't be updated if they already existed. This is because the code didn't yet account for the "update" tag (that is meant to give the option of preventing updating resources when running the script to enter all resources into Redis). I changed the logic to add a resource if "update" is True or the resource doesn't already exist (so it won't if update is False and the resource exists).
2020-08-26	Remove "from __future__ import new_feature" statements	BonfaceKilz
	See: <https://docs.python.org/2/library/2to3.html#2to3fixer-future>
2020-07-22	It should add new resources to Redis automatically now	zsloan

2020-07-06	Fixed some of the logic with how traits are authenticated to avoid situation ↵	zsloan
	where a trait is authenticated twice
2020-06-24	Temporary partial fix to issue of resources without info; need to add ↵	zsloan
	something that automatically inserts resources with default privileges
2020-06-17	A user's id is now set as a parameter if it doesn't already existauthentication_test	zsloan

2020-06-17	Adding all the authentication stuff	zsloan

2020-06-05	Commiting other current group/resource management code, plus the new files	zsloan

2020-06-04	Really should have split this into many more commits:	zsloan
	- Now use proxy to pull trait data and hide traits/results that the user doesn't have view permission for - Created a factory method for creating trait ob so it can return None when user doesn't have view permissions (this is why such a large number of files are changed) - Added metadata to permutation export - Added current group management code - Added fixed password verification e-mail code
2020-05-28	Added lines calling proxy for publish datasets + added some resource redis ↵	zsloan
	queries and a missing import for the hmac functions
2020-05-12	Added change for F2s in r/qtl and fixed minor issue in save_user in redis_tools	zsloan

2020-05-07	Committing current progress on group manager + a minor fix in dataset.py	zsloan

2020-05-06	Commiting a few minor changes plus returning rqtl_mapping.py to the same as ↵	zsloan
	on testing branch before merging Danny's changes and testing them
2020-02-12	Fixed issue that broke some logins with the new redis user code	zsloan

2020-01-23	Forgot to commit new file containing Redis functions	zsloan