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path: root/wqflask/utility/helper_functions.py
AgeCommit message (Expand)Author
2014-08-12Fixed the scrollable data tables for the show trait page...Added the option to display the rqtl results (and soon other mapping results) as either a manhattan plot or "interval map" style curve chart Removed a couple unnecessary javascript imports Changed the function in helper_functions.py that creates the trait and dataset objects, making it to where the trait object also gets qtl info Fixed color by trait after it was broken by the "scatterplot matrix" function Zachary Sloan
2014-07-18Added outlier highlighting...Changed order of tabs in statistics panel on trait page Started working on heatmap Zachary Sloan
2014-05-05Committing a bunch of changes related to integrating GEMMA and...adding the correlation matrix page Zachary Sloan
2013-07-19Finished integrating code that reads sample list from geno files...withouot using reaper and caches results so it doesn't need to read the file every single time someone loads a page Zachary Sloan
2013-06-13Fixed issue where too much memory was used as a result of creating a...dataset object for each trait in the correlation results Added new fields/columns for each trait in the correlation result table (max LRS, max LRS location, mean expression) Fixed error if trait doesn't have these fields Lei Yan
2013-03-12Got cashing working with pickleZachary Sloan
2013-03-07Created file temp_data to store data related to progress...of the marker regression calculations Storing progress of kinship matrix calculation in variable as portion of 45 (the rough percent of total marker regression calculation time Zachary Sloan
2013-02-19Made lines for manhattan plot proportional to chromosome lengthsZachary Sloan
2013-01-31Changed reference to 'dataset_name' in keywords to 'dataset' to get...page to work, but will change all references to the dataset name to 'dataset_name' in future to avoid confusion between the dataset name and the actual dataset object Zachary Sloan
2013-01-22Pushed through a few errors in getting the correlation page runningZachary Sloan
2013-01-18Renamed CorrelationPage.py to show_corr_results.py...Worked with correlation code; got to the code that begins to do the actual correlations Created a function "get_dataset_and_trait" in the new file "helper_functions.py" because the code initializing the dataset and trait objects was repeated in multiple places Zachary Sloan