Age | Commit message (Expand) | Author |
2014-08-12 | Fixed the scrollable data tables for the show trait page...Added the option to display the rqtl results (and soon other mapping results)
as either a manhattan plot or "interval map" style curve chart
Removed a couple unnecessary javascript imports
Changed the function in helper_functions.py that creates the trait and dataset
objects, making it to where the trait object also gets qtl info
Fixed color by trait after it was broken by the "scatterplot matrix" function
| Zachary Sloan |
2014-07-18 | Added outlier highlighting...Changed order of tabs in statistics panel on trait page
Started working on heatmap
| Zachary Sloan |
2014-05-05 | Committing a bunch of changes related to integrating GEMMA and...adding the correlation matrix page
| Zachary Sloan |
2013-07-19 | Finished integrating code that reads sample list from geno files...withouot using reaper and caches results so it doesn't need
to read the file every single time someone loads a page
| Zachary Sloan |
2013-06-13 | Fixed issue where too much memory was used as a result of creating a...dataset object for each trait in the correlation results
Added new fields/columns for each trait in the correlation result table
(max LRS, max LRS location, mean expression)
Fixed error if trait doesn't have these fields
| Lei Yan |
2013-03-12 | Got cashing working with pickle | Zachary Sloan |
2013-03-07 | Created file temp_data to store data related to progress...of the marker regression calculations
Storing progress of kinship matrix calculation in variable as
portion of 45 (the rough percent of total marker regression calculation
time
| Zachary Sloan |
2013-02-19 | Made lines for manhattan plot proportional to chromosome lengths | Zachary Sloan |
2013-01-31 | Changed reference to 'dataset_name' in keywords to 'dataset' to get...page to work, but will change all references to the dataset name to
'dataset_name' in future to avoid confusion between the dataset name
and the actual dataset object
| Zachary Sloan |
2013-01-22 | Pushed through a few errors in getting the correlation page running | Zachary Sloan |
2013-01-18 | Renamed CorrelationPage.py to show_corr_results.py...Worked with correlation code; got to the code that
begins to do the actual correlations
Created a function "get_dataset_and_trait" in
the new file "helper_functions.py" because the
code initializing the dataset and trait objects
was repeated in multiple places
| Zachary Sloan |