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2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-05On branch masterLei Yan
2014-02-04On branch masterLei Yan
2014-02-04On branch masterLei Yan
2014-02-04On branch masterLei Yan
2014-02-04On branch masterLei Yan
2014-02-04On branch masterLei Yan
2014-02-04On branch masterLei Yan
2014-02-04On branch masterLei Yan
2014-02-03On branch masterLei Yan
2014-02-03On branch masterLei Yan
2014-02-03On branch masterLei Yan
2014-02-03On branch masterLei Yan
2014-01-31On branch masterLei Yan
2014-01-31On branch masterLei Yan
2014-01-25On branch masterLei Yan
2014-01-25On branch masterLei Yan
2014-01-24On branch masterLei Yan
2014-01-24On branch masterLei Yan
2014-01-24On branch masterLei Yan
2014-01-24Committer: root <root@alexandria.uthsc.edu>root
On branch master
2013-10-11Merge /home/lei/geneZachary Sloan
Conflicts: wqflask/maintenance/quick_search_table.py
2013-10-08Did some work with interval mapping page; will use qtl reaper to doZachary Sloan
the mapping, since it is reliable/fast and avoids us having to rewrite from scratch using something like r/qtl
2013-09-24Did some work towards doing the tissue correlation for all traitsroot
in a dataset (in order to sort by tissue correlation instead of sample correlation).
2013-08-14Removed some duplicate files in the maintenance folderZachary Sloan
2013-08-13Added several test files and the file with the class thatZachary Sloan
they import (browser_test.py)
2013-08-07Fixed things with the dataset dropdowns and mRNA datasetsZachary Sloan
Improved the templates for a couple pages related to changing user password, etc
2013-08-02Fixed a bug related to groups with genofiles (not sure if it makes senseZachary Sloan
for them not to have genofiles yet)
2013-07-23Fixed a couple issues with he quick_search_table.py scriptZachary Sloan
Added notes on using percona to optimise mysql to gn_installation_notes.txt Started moving "get_trait_data" to DataSet since it is the same regardless of the particular DataSet subclass (PhenotypeDataSet, MrnaAssayDataSet, etc)
2013-07-19Finished integrating code that reads sample list from geno filesZachary Sloan
withouot using reaper and caches results so it doesn't need to read the file every single time someone loads a page
2013-07-19Created file gen_group_samplelists that iterates through all genofilesZachary Sloan
and builds each groups' samplelist
2013-07-18Added Amelie's rat data genotypesZachary Sloan
Got human mapping mostly working Fixed dataset dropdown menus
2013-07-18Merge branch 'master' of https://github.com/zsloan/genenetworkZachary Sloan
Conflicts: wqflask/base/webqtlConfigLocal.py wqflask/maintenance/gen_select_dataset.py wqflask/wqflask/static/new/javascript/dataset_menu_structure.json
2013-07-18Added to installation notesZachary Sloan
Removed webqtlConfigLocal file containing passwords Updated main page dropdown menus (dataset_menu_structure.json)
2013-07-17Fixed gen_select_dataset.pyZachary Sloan
Appended redis installation info to notes
2013-05-02Got quick search code running (but not displaying properly)Zachary Sloan
Code that processes subset of snps works, in process of putting into a class
2013-04-26Added file that checks how much time is added to a loop's runtime by print ↵Zachary Sloan
statements Continued work on file that processes each individual chunk of the snp iterator/plink input
2013-04-24Began writing code that writes some objects used in LMM to redisZachary Sloan
and writes/reads eachitem in the plink_input
2013-04-24Checking in quick_search_table.py before using pylinZachary Sloan
2013-04-24Fixed issue with the part of quick_search_table.py that loads phenotype traitsZachary Sloan
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