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2019-03-27Changed gen_select_dataset.py to be able to show multiple datasets under the ...zsloan
2018-12-21Fixed collections so they can be very large (1000+ traits)zsloan
2018-12-05Fixed issue where SNP track for mapping did not appear correctlyzsloan
2018-11-20Added option to select chromosome from trait page when mappingzsloan
2018-10-11- Added fix for GEMMA LOCOzsloan
2018-10-01- Can now remove cofactors from correlation scatterplot and select them by ju...zsloan
2018-05-25Fixed issue causing anonymous collections to not work on my branch and stagin...zsloan
2018-05-17Added script to quantile normalize a data set and enter its normalized sample...zsloan
2018-04-23Changed GEMMA mapping to use -lmm 2 (Likelihood ratio test) as a parameter in...zsloan
2018-04-16Resolved conflicts after pulling changeszsloan
2018-04-12README and docsPjotr Prins
2018-04-09Removed unused code from get_select_dataset.py and get_group_samplelists.py s...zsloan
2018-04-09Removed unused code from convert_geno_to_bimbam.py and corestats.pyzsloan
2017-12-06Fixed drop-down group orderzsloan
2017-12-04Fixed drop-down scripts to more appropriately deal with BXD300 groups (though...zsloan
2017-11-06Replaced Histogram and Bar Chart with Plotly version and added new Box Plot w...zsloan
2017-09-07Added the script to convert bimbam to kinship matriceszsloan
2017-09-05Added file converting genofiles to bimbamzsloan
2017-05-21Merge from the diet branch.Pjotr Prins
2017-02-08Changed the way .fam files are written/read, which fixes the issue with GEMMA...zsloan
2016-12-12Moved a bunch of functions out of the GeneralTrait class that didn't need to ...zsloan
2016-09-30Add missing __init__.pyPjotr Prins
2016-09-13Fixed the path for the json file in gen_select_dataset.py since it was wrong ...zsloan
2016-09-13Run scripts from ./wqflask - just like the webserverPjotr Prins
2016-09-10CommentPjotr Prins
2016-09-10Support for running maintenance scripts so they can pick up all webserver set...Pjotr Prins
2016-07-16README: added infoPjotr Prins
2016-06-19Renamed settings so they are grouped togetherPjotr Prins
2016-06-18Changed file permssions to non-executablePjotr Prins
2016-06-18Disable setting sys.pathsPjotr Prins
2016-06-17ConflictPjotr Prins
2016-06-17Removed trailing spaces in .py and .js filesPjotr Prins
2016-06-16Generating the menu is now obsoletePjotr Prins
2016-04-20More hard-codedpjotrp
2016-04-20[PATCH 037/100] WebQtlConfig: sanitizing naming and used varsPjotr Prins
2016-02-18Edited gen_select_dataset to remove confidential datasetszsloan
2016-01-29Info button should now work for phenotype and genotype datasetszsloan
2016-01-27Merge branch 'master' of github.com:genenetwork/genenetwork2 into developmentzsloan
2016-01-27Added info button to Dataset dropdown on index pagezsloan
2016-01-26Removed a bunch of files/directories/packages that are no longer used and som...zsloan
2015-07-09Forgot to add one change to the last commitzsloan
2015-07-09Mapping methods now check for existing genotype files.zsloan
2015-05-11Fixed gen_select_dataset so that it does not include Phenotype andzsloan
2014-08-28Added a validation that warns the user of the number of permutations forZachary Sloan
2014-07-14Merge /home/zas1024/geneLei Yan
2014-06-25Added Karl's correlation matrix codeZachary Sloan
2014-05-05Committing a bunch of changes related to integrating GEMMA andZachary Sloan
2014-03-05Improved load_genotypes.pyLei Yan
2014-02-28Made some changes to Lei's IO code for GN1 and GN2 genofilesLei Yan
2014-02-23On branch masterLei Yan
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