genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Collapse)	Author
2018-10-11	- Added fix for GEMMA LOCO	zsloan
	- Added all current SNP browser code (not complete yet) - Added change to convert_geno_to_bimbam that makes it ignore .geno files marked as "filler" (so ones where the .geno file is fake and we sometimes directly receive the genotypes as BIMBAM) - Changes TheSpecies object in species.py to accept species name as well as dataset name
2018-10-01	- Can now remove cofactors from correlation scatterplot and select them by ↵	zsloan
	just clicking their row in collection - Cofactor color picker now works in Safari/Macs - Displays N for relevant samples in trait page sample table - Don't show bar chart when N>256 - Mapping loading page contents better centered - Anonymous collections timeout correctly listed as 30 days now - Minor allele frequency can actually be changed for GEMMA now (previously didn't work) - Fixed transcript position marker location for mapping results - Notifies user if their e-mail isn't associated with an account when they attempt to request forgotten password - Users can now map with submitted traits - Histogram width changes depending upon number of bins (need to improve this still) - Improved Q-q plot (previously called "probability plot")
2018-04-09	Removed unused code from convert_geno_to_bimbam.py and corestats.py	zsloan

2017-09-05	Added file converting genofiles to bimbam	zsloan