Age | Commit message (Collapse) | Author | |
---|---|---|---|
2021-04-30 | autopep8: Fix E121,E122,E123,EI24,E125,E126,E127,E128,E129,E131,E133 | BonfaceKilz | |
2021-04-30 | autopep8: Fix W291, W292, W293, W391 | BonfaceKilz | |
2021-04-30 | autopep8: Fix E70 and E701 | BonfaceKilz | |
2021-04-30 | autopep8: Fix E501 | BonfaceKilz | |
2021-04-30 | autopep8: Fix E301,E302,E303,E304,E305,E306 | BonfaceKilz | |
2021-04-30 | autopep8: Fix E20-E27 | BonfaceKilz | |
Run: python -m autopep8 --in-place --recrusive ./ --select\ E20,E211,E22,E224,E224,E225,E226,E227,E228,E231,E241,\ E242,E251,E252,E26,E265,E266,E27 -p 3 | |||
2021-04-29 | Run `sed -i 's/(object)//g'` | BonfaceKilz | |
See: https://is.gd/pL7IJF Ran: find . \( -type d -name .git -prune \) -o -type f -print0 | xargs -0 sed -i 's/(object)//g' | |||
2020-08-26 | Remove "from __future__ import new_feature" statements | BonfaceKilz | |
See: <https://docs.python.org/2/library/2to3.html#2to3fixer-future> | |||
2018-12-21 | Fixed collections so they can be very large (1000+ traits) | zsloan | |
Added option to submit traits in collection to BNW Fixed issue with "x" values for user-submitted traits Fixed issue where post-publications descriptions were wrongly appearing in global search results | |||
2018-10-11 | - Added fix for GEMMA LOCO | zsloan | |
- Added all current SNP browser code (not complete yet) - Added change to convert_geno_to_bimbam that makes it ignore .geno files marked as "filler" (so ones where the .geno file is fake and we sometimes directly receive the genotypes as BIMBAM) - Changes TheSpecies object in species.py to accept species name as well as dataset name | |||
2018-10-01 | - Can now remove cofactors from correlation scatterplot and select them by ↵ | zsloan | |
just clicking their row in collection - Cofactor color picker now works in Safari/Macs - Displays N for relevant samples in trait page sample table - Don't show bar chart when N>256 - Mapping loading page contents better centered - Anonymous collections timeout correctly listed as 30 days now - Minor allele frequency can actually be changed for GEMMA now (previously didn't work) - Fixed transcript position marker location for mapping results - Notifies user if their e-mail isn't associated with an account when they attempt to request forgotten password - Users can now map with submitted traits - Histogram width changes depending upon number of bins (need to improve this still) - Improved Q-q plot (previously called "probability plot") | |||
2018-04-09 | Removed unused code from convert_geno_to_bimbam.py and corestats.py | zsloan | |
2017-09-05 | Added file converting genofiles to bimbam | zsloan | |