genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Collapse)	Author
2023-06-22	Update calls to `database_connection` function	Frederick Muriuki Muriithi
	Pass in the database URI at call time.
2022-09-12	Check db resultset before indexing into it	Frederick Muriuki Muriithi
	The assumption that the resultset will never be empty was leading to a lot of errors.
2022-08-31	Replace fetchall, fetchone, fetch1 with database_connection	Munyoki Kilyungi
	* wqflask/base/data_set.py: Replace "db.call" import with "database_connection". (create_datasets_list): Use "database_connection" to fetch data. (DatasetGroup.__init__): Ditto. (DataSet.retrieve_other_names): Ditto. (PhenotypeDataSet.setup): Remove query escaping in string and format the string. (GenotypeDataSet.setup): Ditto. (MrnaAssayDataSet.setup): Ditto. * wqflask/db/webqtlDatabaseFunction.py: Remove db.call import. (retrieve_species): Use database_connection() to fetch data. (retrieve_species_id): Ditto.
2021-05-26	db: webqtlDatabaseFunction: Remove comment	BonfaceKilz

2021-05-26	db: webqtlDatabaseFunction: Remove logger info	BonfaceKilz

2021-04-30	autopep8: Fix E501	BonfaceKilz

2021-04-30	autopep8: Fix E301,E302,E303,E304,E305,E306	BonfaceKilz

2021-04-30	autopep8: Fix E20-E27	BonfaceKilz
	Run: python -m autopep8 --in-place --recrusive ./ --select\ E20,E211,E22,E224,E224,E225,E226,E227,E228,E231,E241,\ E242,E251,E252,E26,E265,E266,E27 -p 3
2020-08-19	Remove extra whitespace(or add it) from comma separated items	BonfaceKilz
	See: <https://docs.python.org/2/library/2to3.html#2to3fixer-urllib>
2018-04-18	Removed a little more code in webqtlDatabaseFunction.py and do_search	zsloan

2016-06-26	gn_server: introduced one new query to fetch a dataset record and force ↵	Pjotr Prins
	fetch1 to return a tuple
2016-06-23	Remove headers	Pjotr Prins

2016-06-23	Added REST call for species_id	Pjotr Prins

2016-06-23	Removed unused functions	Pjotr Prins

2016-06-23	DB: created fetch1 function which can do both SQL and GN_SERVER	Pjotr Prins

2016-06-23	Backend: moved methods into call module	Pjotr Prins

2016-06-23	Refactored dir name dbFunction to db	Pjotr Prins