genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Collapse)	Author
2012-11-28	Made some small changes to get code working for genotype searches	Zachary Sloan

2012-11-27	Created subclass for each main data set type and moved the code	Zachary Sloan
	for getting trait info that was in search_results.py into its respective class Renamed webqtlDataset to DataSet/create_dataset in webqtlTrait.py, webqtlDatabaseFunction.py, and CorrelationPage.py Got search page running again for mRNA assay data sets with these changes
2012-11-27	Renamed webqtlDataSet.py to data_set.py	Zachary Sloan
	Renamed the class webqtlDataset to DataSet Finished cisLRS and transLRS search types in d_search.py Fixed parent/f1 issue in show_trait.py
2012-10-30	Worked on search_result.py code related to adding clause item to queries	Zachary Sloan
	Continued work on redesigning the trait data page design
2012-10-26	Got search page working for mice with a single gene search	Zachary Sloan

2012-10-25	Worked on search page code; got to the part that actually does the search	Zachary Sloan
	Renamed RISet and cross to "group" throughout webqtlDataset.py and search_results.py
2012-10-24	Now builds json datastructure for menus correctly	Zachary Sloan

2012-10-23	Finished coffeescript that handles the home page dataset selection dropdowns	Zachary Sloan

2012-09-28	Removed show_trait_page.py and moved relevant code over to ↵	Zachary Sloan
	DataEditingPage.py (though the user security stuff still needs to be moved over)
2012-09-28	Finished getting extra attributes to display correctly in the trait data table	Zachary Sloan

2012-09-27	Worked on getting attributes in the SampleList object to display data ↵	Zachary Sloan
	properly, changed SampleList from an object list to object
2012-09-25	Got trait data page running for human dataset, changed list of sample ↵	Zachary Sloan
	objects to a SampleList object
2012-09-25	Fixed issue with parent strains appearing twice and began replacing variable ↵	Zachary Sloan
	names (strain -> sample, for example)
2012-09-19	Made pearson/spearman options disappear if lit correlation is chosen, began ↵	Zachary Sloan
	to address how to deal with Trait object in CorrelationPage
2012-09-14	Got the dynamic javascript stats table working	Zachary Sloan

2012-09-13	Worked on improving readData and informativeStrains functions in ↵	Zachary Sloan
	webqtlFormData while trying to get correlation page running
2012-09-12	Worked towards correctly passing form data to correlation page and addressed ↵	Zachary Sloan
	various bugs that arose while doing so
2012-09-07	Worked with passing form data to correlation page	Zachary Sloan

2012-08-29	Fixed so that outliers are now correctly highlighted	Zachary Sloan

2012-08-28	Various changes related to the webqtlCaseData object and the way ↵	Zachary Sloan
	values/variances/num_cases are called in DataEditingPage.py
2012-08-23	Various minor changes	Zachary Sloan

2012-06-06	Most of the top fields working	Sam Ockman

2012-06-05	Ran reindent.py recursively on wqflask directory	Sam Ockman

2012-06-04	Checkpoint along modifying for data trait and analysis	Sam Ockman

2012-06-03	Now using modified webqtlformdata for trait analysis	Sam Ockman

2012-06-03	Before changing fd for trait analysis into a webQTLFormData object	Sam Ockman

2012-06-03	Cleaning up trait stuff in flask	Sam Ockman

2012-05-24	Trying to get stuff working under new structure	Sam Ockman