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AgeCommit message (Expand)Author
2022-09-08Fix sql queriesMunyoki Kilyungi
2022-09-08Add missing "," in cursor.execute()Munyoki Kilyungi
2022-09-08Remove intermediate variables that are only used onceMunyoki Kilyungi
2022-09-08Delete dead importsMunyoki Kilyungi
2022-09-08Replace g.db with database_connection() context managerMunyoki Kilyungi
2022-09-08Delete logger importMunyoki Kilyungi
2022-09-08Replace assertion with Value Error for non-existent datasetMunyoki Kilyungi
2022-09-08Replace g.db with database_connection() context managerMunyoki Kilyungi
2022-09-08Merge pull request #727 from Alexanderlacuna/feature/use-textfilesAlexander Kabui
2022-09-07catch general errors this will recreate the fileAlexander_Kabui
2022-09-06Fix error with dataset menu query in data_set.pyzsloan
2022-09-06Merge branch 'testing' into feature/generalize_tableszsloan
2022-09-06Set up the self.* variables from query resultsFrederick Muriuki Muriithi
2022-09-06Use dataset name if dataset group name is not set.Frederick Muriuki Muriithi
2022-08-31Delete unused modulesMunyoki Kilyungi
2022-08-31Replace fetchall, fetchone, fetch1 with database_connectionMunyoki Kilyungi
2022-08-31Remove "with Bench ..." callsMunyoki Kilyungi
2022-08-31Remove usage of "logger" and un-necessary comments wrt the sameMunyoki Kilyungi
2022-08-31add new environment variable:TEXTDIRAlexander_Kabui
2022-07-12Include genotypes for F1s/reference/non-reference strains when fetchingzsloan
2022-06-23Change jsonable in GeneralTrait so that it passes all necessary tablezsloan
2022-06-23Convert trait.view to string for conversion to JSONzsloan
2022-06-13Check for chromosome of 'Un' and print location as 'Not available' in such caseszsloan
2022-04-14Add group code to loading pages when applicablezsloan
2022-03-25Fix issues that prevented genotype traits from being added to collectionszsloan
2022-02-21Fix incorrect dataset trait data cachingzsloan
2021-11-25Delete noisy loggingBonfaceKilz
2021-11-23resolve merge conflictsAlexander Kabui
2021-11-23pep8 formatting remove dead variablesAlexander Kabui
2021-11-17refactor sql query & date formattingAlexander Kabui
2021-11-17replace redis fetch for cached timestamp with a queryAlexander Kabui
2021-11-17isolate SQL_URI parse to a functionAlexander Kabui
2021-11-17use a dynamic value for the db_nameAlexander Kabui
2021-11-17temp disable query cachingAlexander Kabui
2021-11-16use comprehension list;fix typoAlexander Kabui
2021-11-16pep8 formatting remove debug statementsAlexander Kabui
2021-11-16test generate new filesAlexander Kabui
2021-11-16refactor:fix on the query :modify cache pointAlexander Kabui
2021-11-04check for null timestampAlexander Kabui
2021-11-04store table timestamp on redisAlexander Kabui
2021-11-04init function to get the table timestampAlexander Kabui
2021-11-04pep8 formatting ,minor fixesAlexander Kabui
2021-11-04generate filename hashAlexander Kabui
2021-11-04fetch cached resultsAlexander Kabui
2021-11-04function to cache sample resultsAlexander Kabui
2021-10-22Replace hardcoded GN proxy URLs in trait.py with one pulled from settingszsloan
2021-08-20Fixed some logic in trait.py that could cause a problem if a dataset_name was...zsloan
2021-08-17Merge pull request #598 from zsloan/feature/add_filter_by_study_sampleszsloan
2021-08-13base: data_set: Remove unnecessary comments and logging statementsBonfaceKilz
2021-08-12Return empty list instead of None in get_study_samplelistszsloan