genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2020-05-07	Fixed blatseq issue and geno correlation issueblatseq_fix	zsloan
2020-05-07	Committing current progress on group manager + a minor fix in dataset.py	zsloan
2020-04-27	Added timeout for when/if it does the REST API query, so it doesn't hang inde...	zsloan
2020-04-27	Made change that should allow dataset structure to be loaded from Redis inste...	zsloan
2020-04-26	Removed the code that was still writing the database menu JSON	zsloan
2020-04-24	Replaced hard-coded instances of GN2 urls with ones pulled from settings file	zsloan
2020-04-24	Made a fix that should prevent the issue where new datasets cause an error wh...	zsloan
2020-04-06	Added Mean column for phenotype traits in search and global search result tables	zsloan
2020-03-27	Fixed issue where GEMMA wasn't showing up for certain groups	zsloan
2020-03-27	Added integration for using RData files with R/qtl, plus some other changes t...	zsloan
2020-03-09	I think this should complete consolidating all the collections code.	zsloan
2020-03-03	Forgot to replace code referring to hmac function user_manager	zsloan
2020-02-07	Users can now add and do mapping on genotype files that only include a subset...	zsloan
2020-02-06	Fixed encoding issue	zsloan
2020-01-22	Fixed issue that caused submitting temp traits to not work	zsloan
2020-01-08	Made change that I think should fix the unicode stuff once and for all	zsloan
2019-12-17	Added RGD link to trait page and removed Genotation link since it isn't working	zsloan
2019-12-04	Added M to the possible non-number 'chromosome' names	zsloan
2019-12-04	Fixed error that sometimes occurs if there's no mean expression and changed i...	zsloan
2019-11-21	Use updated phenotype display IDs for all phenotypes with codes now, not just...	zsloan
2019-11-21	Added 3-letter codes to unpublished phenotype traits and fixed issue with ord...	zsloan
2019-11-14	Changed code to rebuild dataset list each time you view the trait page to avo...	zsloan
2019-11-05	Fixed issue with ordering items in correlation dataset select dropdown	zsloan
2019-10-24	Changed logic for generating drop-downs such that it shows the correct Phenot...	zsloan
2019-10-18	Added UniProt link and fixed issue that caused sample lists to not be formed ...	zsloan
2019-10-04	Fixed issue where there was an error if the REST API used for aliases was down	zsloan
2019-08-22	Changed header drop-down menu layout	zsloan
2019-08-01	Updated aliases to get all species aliases and remove duplicates	zsloan
2019-08-01	Added wikidata aliases	zsloan
2019-08-01	Made some more aesthetic changes to various pages and charts/figures	zsloan
2019-07-23	Added change to automatically update datasets list using rest api instead of ...	zsloan
2019-07-18	Made change that should fix encoding issue, fingers crossed	zsloan
2019-07-03	Fixed bug for creating one of the third party links on the trait page	zsloan
2019-06-24	Got non-LOCO GEMMA mapping working with gemma-wrapper (so caching should work...	zsloan
2019-06-18	Fixed issue with sorting involving 0's on trait page	zsloan
2019-06-05	Fixed issue that caused interval mapping to not work because the python imple...	zsloan
2019-06-04	Added GeneMANIA link	zsloan
2019-05-24	Replaced qtlreaper Dataset object with python object	zsloan
2019-05-14	Added all of the third party links from GN1	zsloan
2019-05-06	Removed some unused imports of htmlgen	zsloan
2019-03-18	- Added PCA traits to correlation matrix. You can't change their names yet or...	zsloan
2019-03-07	Changed the way covariates are displayed when selected for mapping	zsloan
2019-02-22	Fixed some appearance issues with several tables	zsloan
2019-02-15	Fixed error caused by change to N values in database (now takes strings inste...	zsloan
2019-02-13	Removed pylmm references and related functions	Pjotr Prins
2019-02-12	Added GeneWeaver linkout	zsloan
2019-02-05	Fixed issue with getting marker info that affected heatmap and possibly other...	zsloan
2019-01-11	Got InDel working for Variant Browser	zsloan
2018-12-21	Fixed collections so they can be very large (1000+ traits)	zsloan
2018-10-24	- SNP Browser is mostly complete; just need to test more and add SNP density ...	zsloan