Age | Commit message (Collapse) | Author |
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other places it's called, like search_results.py
Added other trait info fields to correlation results page
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dataset object for each trait in the correlation results
Added new fields/columns for each trait in the correlation result table
(max LRS, max LRS location, mean expression)
Fixed error if trait doesn't have these fields
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of storing list of GeneralTrait objects
Added print statements to track memory usage
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Added spearman correlation to show_corr_results and template
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Wrote function in dataset.py that gets all the traits in a dataset
and their sample values
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Worked with correlation code; got to the code that
begins to do the actual correlations
Created a function "get_dataset_and_trait" in
the new file "helper_functions.py" because the
code initializing the dataset and trait objects
was repeated in multiple places
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to it
added asbolute_import in data_set.py and trait.py
Made several minor changes and deleted commented out code in trait.py
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of samples for each group
Got show_trait page to display for genotype traits
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remove use of the formData object and cursor
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Renamed webqtlTrait class to GeneralTrait
Began process of removing fd from show_trait.py
Created DatasetGroup object in data_set.py (this may end up becoming
its own file later if it becomes big enough)
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