genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2015-08-26	Fixed issue with colums for the gene global search (still need to change for ...	zsloan
2015-07-20	Fixed the code that generates the dataset selection drop-down for correlations	zsloan
2015-07-10	Fixed the genofile_parser.py script since some .geno files had been incorrect...	zsloan
2015-07-09	Mapping methods now check for existing genotype files.	zsloan
2015-07-07	Added index column and changed the way location is displayed for search results	zsloan
2015-06-29	Merge pull request #72 from lomereiter/issue69	zsloan
2015-06-22	fixed a few potential security issues	Artem Tarasov
2015-06-18	fix all_samples_ordered	Artem Tarasov
2015-05-21	Changed the digits for additive effect and megabases in the search results table	zsloan
2015-05-13	combine three similar queries into one	Artem Tarasov
2015-05-13	replace multiple tissue queries with a single one	Artem Tarasov
2015-05-13	cache datasets for each group	Artem Tarasov
2015-05-11	Moved chunks	Pjotr Prins
2015-05-11	Moving pylmm out of the tree	pjotrp
2015-03-17	Converting an absolute path to a relative path	DannyArends
2015-01-30	Fixed several bugs	Zachary Sloan
2014-12-12	Added a additive effect column to search result and collection tables	Zachary Sloan
2014-11-17	Just more changes converting to bootstrap 3	Zachary Sloan
2014-10-17	Added reference, policies, and links pages	Zachary Sloan
2014-08-21	Committer: Lei Yan <lei@penguin.uthsc.edu>	Lei Yan
2014-08-21	Added the option to display mapping results as either an interval mapping	Zachary Sloan
2014-07-18	Merge /home/zas1024/gene	Lei Yan
2014-07-18	Added outlier highlighting	Zachary Sloan
2014-07-18	Correlation table for phenotypes is working	Lei Yan
2014-07-09	Updated coffeescript, svg export working fine, interval mapping zoom working	Zachary Sloan
2014-06-25	Added Karl's correlation matrix code	Zachary Sloan
2014-06-06	Implimented Karl Broman's lodchart code for the interval mapping function.	Zachary Sloan
2014-05-05	Committing a bunch of changes related to integrating GEMMA and	Zachary Sloan
2014-01-30	Most of the work is done towards running lmm.py from the command line	Zachary Sloan
2014-01-29	Limited number of markers in marker regression result table to	Zachary Sloan
2014-01-23	Histogram is working	Zachary Sloan
2014-01-03	Wrote some code for the histogram figure	Zachary Sloan
2013-11-26	Made some progress towards getting the traits inside a collection to display ...	Zachary Sloan
2013-11-25	Got the interval mapping results into a table	Zachary Sloan
2013-10-25	Began working on color coding bar chart by extra attributes	Zachary Sloan
2013-10-15	Changed templates to call the header macro	Zachary Sloan
2013-10-11	Merge /home/lei/gene	Zachary Sloan
2013-10-10	Almost have correlation working for non-primary strain/group	Lei Yan
2013-10-09	Improved some of the code related to the correlation page	Lei Yan
2013-10-08	Literature correlation works when it is selected as the sorted	Lei Yan
2013-10-08	Did some work with interval mapping page; will use qtl reaper to do	Zachary Sloan
2013-09-24	Did some work towards doing the tissue correlation for all traits	root
2013-08-21	Just removed a couple print statements	Zachary Sloan
2013-08-15	Removed the markers with no variance (and thus no p-values) from the	Zachary Sloan
2013-08-13	Added several test files and the file with the class that	Zachary Sloan
2013-08-07	Fixed things with the dataset dropdowns and mRNA datasets	Zachary Sloan
2013-08-02	Fixed a bug related to groups with genofiles (not sure if it makes sense	Zachary Sloan
2013-07-30	Just added some print statements to debug an issue with LMM code	Zachary Sloan
2013-07-23	Fixed a couple issues with he quick_search_table.py script	Zachary Sloan
2013-07-19	Finished integrating code that reads sample list from geno files	Zachary Sloan