genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2020-08-20	Disable python2 QTLReaper	BonfaceKilz
2020-08-19	Make Python more idiomatic	BonfaceKilz
2020-08-19	Replace `izip` with python's built-in equivalent	BonfaceKilz
2020-07-27	Abstract away redundant code into set_dataset_key method	BonfaceKilz
2020-07-27	Use the correct redis instance inside object	BonfaceKilz
2020-07-24	Merge pull request #409 from BonfaceKilz/Build/add-tests	zsloan
2020-07-24	Fixed queries that were wrongly returning Data IDs as Ns	zsloan
2020-07-24	Inject redis instance into DatasetType class	BonfaceKilz
2020-07-24	Apply autopep-8	BonfaceKilz
2020-07-24	Remove unused import	BonfaceKilz
2020-06-22	Fixed issue with temp traits not working for trait page functions like correl...	zsloan
2020-06-17	Adding all the authentication stuff	zsloan
2020-05-07	Fixed blatseq issue and geno correlation issueblatseq_fix	zsloan
2020-05-07	Committing current progress on group manager + a minor fix in dataset.py	zsloan
2020-04-27	Added timeout for when/if it does the REST API query, so it doesn't hang inde...	zsloan
2020-04-27	Made change that should allow dataset structure to be loaded from Redis inste...	zsloan
2020-04-26	Removed the code that was still writing the database menu JSON	zsloan
2020-04-24	Replaced hard-coded instances of GN2 urls with ones pulled from settings file	zsloan
2020-04-24	Made a fix that should prevent the issue where new datasets cause an error wh...	zsloan
2020-04-06	Added Mean column for phenotype traits in search and global search result tables	zsloan
2020-03-27	Fixed issue where GEMMA wasn't showing up for certain groups	zsloan
2020-03-27	Added integration for using RData files with R/qtl, plus some other changes t...	zsloan
2020-02-07	Users can now add and do mapping on genotype files that only include a subset...	zsloan
2019-12-04	Added M to the possible non-number 'chromosome' names	zsloan
2019-11-21	Added 3-letter codes to unpublished phenotype traits and fixed issue with ord...	zsloan
2019-11-14	Changed code to rebuild dataset list each time you view the trait page to avo...	zsloan
2019-11-05	Fixed issue with ordering items in correlation dataset select dropdown	zsloan
2019-10-24	Changed logic for generating drop-downs such that it shows the correct Phenot...	zsloan
2019-10-18	Added UniProt link and fixed issue that caused sample lists to not be formed ...	zsloan
2019-07-23	Added change to automatically update datasets list using rest api instead of ...	zsloan
2019-06-24	Got non-LOCO GEMMA mapping working with gemma-wrapper (so caching should work...	zsloan
2019-06-18	Fixed issue with sorting involving 0's on trait page	zsloan
2019-06-05	Fixed issue that caused interval mapping to not work because the python imple...	zsloan
2019-05-24	Replaced qtlreaper Dataset object with python object	zsloan
2019-03-18	- Added PCA traits to correlation matrix. You can't change their names yet or...	zsloan
2019-02-13	Removed pylmm references and related functions	Pjotr Prins
2019-02-05	Fixed issue with getting marker info that affected heatmap and possibly other...	zsloan
2019-01-11	Got InDel working for Variant Browser	zsloan
2018-12-21	Fixed collections so they can be very large (1000+ traits)	zsloan
2018-04-19	Changed width of top bar and a couple other html objects to 100% instead of s...	zsloan
2018-04-06	Mapping figure output now gives more accurate information	zsloan
2017-12-20	Bring in some earlier work - mostly documentation and startup handling	Pjotr Prins
2017-11-06	Replaced Histogram and Bar Chart with Plotly version and added new Box Plot w...	zsloan
2017-06-09	- Changed the way the genofile is set so different genofiles can be selected ...	zsloan
2017-04-17	Added option to remove collections from collection list page	zsloan
2017-04-05	- Temporary traits can be created, viewed, and added to collections	zsloan
2017-02-09	Fixed issue where I forgot to add GeneticType to the query_for_group query fo...	zsloan
2017-02-09	Added genetic_type to DatasetGroup object to differentiate between which grou...	zsloan
2017-02-06	Merge branch 'master' of github.com:zsloan/genenetwork2	zsloan
2017-02-06	Fixed appearance of several tables (search, mapping results, sample data)	zsloan