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path: root/wqflask/base/data_set.py
AgeCommit message (Expand)Author
2013-10-08Did some work with interval mapping page; will use qtl reaper to doZachary Sloan
2013-09-24Did some work towards doing the tissue correlation for all traitsroot
2013-08-21Just removed a couple print statementsZachary Sloan
2013-08-15Removed the markers with no variance (and thus no p-values) from theZachary Sloan
2013-08-13Added several test files and the file with the class thatZachary Sloan
2013-08-07Fixed things with the dataset dropdowns and mRNA datasetsZachary Sloan
2013-08-02Fixed a bug related to groups with genofiles (not sure if it makes senseZachary Sloan
2013-07-30Just added some print statements to debug an issue with LMM codeZachary Sloan
2013-07-23Fixed a couple issues with he quick_search_table.py scriptZachary Sloan
2013-07-19Finished integrating code that reads sample list from geno filesZachary Sloan
2013-07-19Created file gen_group_samplelists that iterates through all genofilesZachary Sloan
2013-07-16Wrote code that can get a dataset's type for every single GNZachary Sloan
2013-06-27Created a group manager page where user administrators can createZachary Sloan
2013-06-26Moved code creating DataSets object to a function in dataset.pyZachary Sloan
2013-06-26Got code that creates DataSets object runningZachary Sloan
2013-06-25Added DataSets class to dataset.py that will be used to create list ofZachary Sloan
2013-06-21Fixed bug where cursor was still being used in queryZachary Sloan
2013-06-19Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flaskZachary Sloan
2013-06-13Fixed issue where too much memory was used as a result of creating aLei Yan
2013-06-12Fixed a couple issues with the template that caused theZachary Sloan
2013-06-11Put trait info for correlation results page into a dictionary insteadLei Yan
2013-05-30Rewrote some code in get_trait_info in dataset.pyLei Yan
2013-05-28Have correlation values appearing in a table in the templateLei Yan
2013-05-23Worked on rewriting the function in data_set.py that gets the sampleLei Yan
2013-05-23Changed the way the query that gets sample ids is generatedLei Yan
2013-05-23Now calculates correlation values for traits, but not yet in templateLei Yan
2013-05-09Just added some print statements so I can show matrix/vectorZachary Sloan
2013-05-08Worked on correlation pageLei Yan
2013-04-09Nick's code works fine with human dataZachary Sloan
2013-04-05Made changes to get pylmm code working with HMDP datasetsZachary Sloan
2013-04-02Committing before splitting code that runs pylmm with plink filesZachary Sloan
2013-04-02pylmm code is running for human data (plink .bed genotype files)Zachary Sloan
2013-03-19Searches work for the full access human datasets with mRNA assayZachary Sloan
2013-03-12Got cashing working with pickleZachary Sloan
2013-03-07Progress bar is now completely workingZachary Sloan
2013-03-02Created generate_probesetfreeze_file to create theZachary Sloan
2013-02-14Have marker regression results displaying as a scatterplot (just the points)Zachary Sloan
2013-02-13Fixed some bugs related to getting the marker regression page workingZachary Sloan
2013-02-12Edited marker_regression.py and data_set.py to store the p-valuesZachary Sloan
2013-01-31Changed fd to kw in search_results.py, commented out some linesZachary Sloan
2013-01-18Renamed CorrelationPage.py to show_corr_results.pyZachary Sloan
2013-01-03Began working on marker_regression.py and created Chromosomes classZachary Sloan
2013-01-03Created template for marek regression page and made the compute button directZachary Sloan
2012-12-18Created new file species.py and species class object TheSpeciesZachary Sloan
2012-12-06Added minimum/maximum to basic statistics tableZachary Sloan
2012-12-06Got show_trait running again for MrnaAssay traitsZachary Sloan
2012-12-06Made many small changes to show_trait/data_set/search_results/trait toZachary Sloan
2012-12-05Renamed webqtlTrait.py to trait.pyZachary Sloan
2012-12-05Continued to make changes related to getting rid of cursor/db_connZachary Sloan
2012-12-04Changed parser to allow quotes (i.e. name="rw williams")Zachary Sloan
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