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2015-04-06Added secure_server.py to gitignore and fixed conflicts for merging Lei's new...zsloan
2015-03-27Removed everything from 'web' directory except genofiles and renamed the dire...zsloan
2015-03-18Fixed the borky genofilezsloan
2015-03-17Added r function for setting genotypes and generating the cross filezsloan
2014-12-18Committer: Lei Yan <lei@penguin.uthsc.edu>...On branch master Lei Yan
2014-11-17Just more changes converting to bootstrap 3Zachary Sloan
2014-11-06Upgraded to bootstrap 3 and updated a lot of html to reflect thisZachary Sloan
2014-06-25Added Karl's correlation matrix code...Improved the "scatterplot matrix" feature on the trait page so that it matches the chosen trait against every selected trait Zachary Sloan
2014-06-06Implimented Karl Broman's lodchart code for the interval mapping function....Suggestive/significant bars and additive effect curve added Zachary Sloan
2014-05-19Fixed sorting on the show trait page...Added/improved the x and y axis on the bar graph and histogram GEMMA working but still really slow Zachary Sloan
2014-05-05Committing a bunch of changes related to integrating GEMMA and...adding the correlation matrix page Zachary Sloan
2013-10-11Merge /home/lei/gene...Conflicts: wqflask/maintenance/quick_search_table.py Zachary Sloan
2013-09-27Added trait links to correlation results...Began adding the code that does the initial sort by literature correlation Lei Yan
2013-09-24Just committing a few additions to the interval mapping codeZachary Sloan
2013-08-14Made some changes related to getting marker regression working for...some datasets Zachary Sloan
2013-07-19Created file gen_group_samplelists that iterates through all genofiles...and builds each groups' samplelist Zachary Sloan
2013-07-18Added Amelie's rat data genotypes...Got human mapping mostly working Fixed dataset dropdown menus Zachary Sloan
2013-06-26Got code that creates DataSets object running...Fixed one genofile that had extra quotation marks in the comments that caused an error Defaults mb_graph_interval to 1 for species without chromosome lengths in megabases Zachary Sloan
2013-05-08Worked on correlation page...Wrote function in dataset.py that gets all the traits in a dataset and their sample values Lei Yan
2013-02-21Adding genotypes and new_genotypes (json files) directories to git...so they can be pulled to the new EC2 server Zachary Sloan
2012-11-27Created subclass for each main data set type and moved the code...for getting trait info that was in search_results.py into its respective class Renamed webqtlDataset to DataSet/create_dataset in webqtlTrait.py, webqtlDatabaseFunction.py, and CorrelationPage.py Got search page running again for mRNA assay data sets with these changes Zachary Sloan
2012-11-02Created search objects for GeneRIF and GeneWiki searches...Got search results to display Refactored the template for show_trait page Zachary Sloan
2012-10-25Worked on search page code; got to the part that actually does the search...Renamed RISet and cross to "group" throughout webqtlDataset.py and search_results.py Zachary Sloan
2012-10-19Reindented genSelectDatasetJS as gen_select_datasetZachary Sloan
2012-10-18Converted selectDatasetMenu.js code to coffeescript as dataset_select_menu.co......Copied the menu variables from selectDatasetMenu.js as dataset_select_items.js Zachary Sloan
2012-10-03Changed css classes used in trait data table and wrote coffeescript code that...grabs the list of samples with an attribute value matching the value the user chose to exclude by. Added HTML5 data properties to table cells as data-column_name to use when excluding samples. Zachary Sloan
2012-10-02Renamed trait_data_and_analysis.html to show_trait.html, DataEditingPage.py t...Zachary Sloan
2012-08-23Various minor changesZachary Sloan
2012-06-25Modified cssSam Ockman
2012-06-25Creating a new css file for use with flaskSam Ockman
2012-06-02Merge and file additionsSam Ockman
2012-06-01added scrollable tab areas for the updated basic statistics outputroot
2012-06-01Views and templates modified to allow template analysisSam Ockman
2012-05-31 On branch develop... Changes to be committed: modified: web/javascript/jqueryFunction.js modified: web/webqtl/correlation/CorrelationPage.py modified: web/webqtl/showTrait/DataEditingPage.py root
2012-05-30Merge branch 'master' of https://github.com/zsloan/genenetwork into flaskSam Ockman
2012-05-23 On branch master... Changes to be committed: modified: web/dbdoc/G2NEI_ILM_Retina_BXD_RI0410.html modified: web/dbdoc/ONCRetILM6_0412.html modified: web/javascript/selectDatasetMenu.js root
2012-05-23Update web/webqtl/correlation/CorrelationPage.pyzsloan
2012-05-23Update web/webqtl/correlation/CorrelationPage.pyzsloan
2012-05-22 On branch master... Changes to be committed: modified: web/webqtl/.htaccess modified: web/webqtl/base/webqtlConfigLocal.py root
2012-05-22 On branch master... Changes to be committed: deleted: web/image/test deleted: web/tmp/test Lei Yan
2012-05-22 On branch master... Changes to be committed: new file: web/image/test new file: web/tmp/test Lei Yan
2012-05-22Merge branch 'master' of github.com:genenetwork/genenetworkLei Yan
2012-05-22 On branch master... Your branch is ahead of 'origin/master' by 2 commits. Changes to be committed: (use "git reset HEAD <file>..." to unstage) deleted: web/webqtl/pubmedsearch/PubmedSearch.py deleted: web/webqtl/pubmedsearch/PubmedSearchRe.py deleted: web/webqtl/pubmedsearch/__init__.py deleted: web/webqtl/search/pubmedsearch.py root
2012-05-22Latest version of GN source codesroot
2012-05-22Latest version of GN source codesroot
2012-05-09Update web/javascript/networkGraph.jsGeneNetwork
2012-05-09Update web/javascript/networkGraph.jsGeneNetwork
2012-05-09Update web/javascript/networkGraph.jsGeneNetwork
2012-05-08Add all the source codes into the github.root
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