| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2014-06-25 | Added Karl's correlation matrix code | Zachary Sloan | |
| Improved the "scatterplot matrix" feature on the trait page so that it matches the chosen trait against every selected trait | |||
| 2014-06-06 | Implimented Karl Broman's lodchart code for the interval mapping function. | Zachary Sloan | |
| Suggestive/significant bars and additive effect curve added | |||
| 2014-05-19 | Fixed sorting on the show trait page | Zachary Sloan | |
| Added/improved the x and y axis on the bar graph and histogram GEMMA working but still really slow | |||
| 2014-05-05 | Committing a bunch of changes related to integrating GEMMA and | Zachary Sloan | |
| adding the correlation matrix page | |||
| 2013-10-11 | Merge /home/lei/gene | Zachary Sloan | |
| Conflicts: wqflask/maintenance/quick_search_table.py | |||
| 2013-09-27 | Added trait links to correlation results | Lei Yan | |
| Began adding the code that does the initial sort by literature correlation | |||
| 2013-09-24 | Just committing a few additions to the interval mapping code | Zachary Sloan | |
| 2013-08-14 | Made some changes related to getting marker regression working for | Zachary Sloan | |
| some datasets | |||
| 2013-07-19 | Created file gen_group_samplelists that iterates through all genofiles | Zachary Sloan | |
| and builds each groups' samplelist | |||
| 2013-07-18 | Added Amelie's rat data genotypes | Zachary Sloan | |
| Got human mapping mostly working Fixed dataset dropdown menus | |||
| 2013-06-26 | Got code that creates DataSets object running | Zachary Sloan | |
| Fixed one genofile that had extra quotation marks in the comments that caused an error Defaults mb_graph_interval to 1 for species without chromosome lengths in megabases | |||
| 2013-05-08 | Worked on correlation page | Lei Yan | |
| Wrote function in dataset.py that gets all the traits in a dataset and their sample values | |||
| 2013-02-21 | Adding genotypes and new_genotypes (json files) directories to git | Zachary Sloan | |
| so they can be pulled to the new EC2 server | |||
| 2012-11-27 | Created subclass for each main data set type and moved the code | Zachary Sloan | |
| for getting trait info that was in search_results.py into its respective class Renamed webqtlDataset to DataSet/create_dataset in webqtlTrait.py, webqtlDatabaseFunction.py, and CorrelationPage.py Got search page running again for mRNA assay data sets with these changes | |||
| 2012-11-02 | Created search objects for GeneRIF and GeneWiki searches | Zachary Sloan | |
| Got search results to display Refactored the template for show_trait page | |||
| 2012-10-25 | Worked on search page code; got to the part that actually does the search | Zachary Sloan | |
| Renamed RISet and cross to "group" throughout webqtlDataset.py and search_results.py | |||
| 2012-10-19 | Reindented genSelectDatasetJS as gen_select_dataset | Zachary Sloan | |
| 2012-10-18 | Converted selectDatasetMenu.js code to coffeescript as ↵ | Zachary Sloan | |
| dataset_select_menu.coffee Copied the menu variables from selectDatasetMenu.js as dataset_select_items.js | |||
| 2012-10-03 | Changed css classes used in trait data table and wrote coffeescript code that | Zachary Sloan | |
| grabs the list of samples with an attribute value matching the value the user chose to exclude by. Added HTML5 data properties to table cells as data-column_name to use when excluding samples. | |||
| 2012-10-02 | Renamed trait_data_and_analysis.html to show_trait.html, DataEditingPage.py ↵ | Zachary Sloan | |
| to show_trait.py, and trait_data_and_analysis.coffee to show_trait.coffee | |||
| 2012-08-23 | Various minor changes | Zachary Sloan | |
| 2012-06-25 | Modified css | Sam Ockman | |
| 2012-06-25 | Creating a new css file for use with flask | Sam Ockman | |
| 2012-06-02 | Merge and file additions | Sam Ockman | |
| 2012-06-01 | added scrollable tab areas for the updated basic statistics output | root | |
| 2012-06-01 | Views and templates modified to allow template analysis | Sam Ockman | |
| 2012-05-31 | On branch develop | root | |
| Changes to be committed: modified: web/javascript/jqueryFunction.js modified: web/webqtl/correlation/CorrelationPage.py modified: web/webqtl/showTrait/DataEditingPage.py | |||
| 2012-05-30 | Merge branch 'master' of https://github.com/zsloan/genenetwork into flask | Sam Ockman | |
| 2012-05-23 | On branch master | root | |
| Changes to be committed: modified: web/dbdoc/G2NEI_ILM_Retina_BXD_RI0410.html modified: web/dbdoc/ONCRetILM6_0412.html modified: web/javascript/selectDatasetMenu.js | |||
| 2012-05-23 | Update web/webqtl/correlation/CorrelationPage.py | zsloan | |
| 2012-05-23 | Update web/webqtl/correlation/CorrelationPage.py | zsloan | |
| 2012-05-22 | On branch master | root | |
| Changes to be committed: modified: web/webqtl/.htaccess modified: web/webqtl/base/webqtlConfigLocal.py | |||
| 2012-05-22 | On branch master | Lei Yan | |
| Changes to be committed: deleted: web/image/test deleted: web/tmp/test | |||
| 2012-05-22 | On branch master | Lei Yan | |
| Changes to be committed: new file: web/image/test new file: web/tmp/test | |||
| 2012-05-22 | Merge branch 'master' of github.com:genenetwork/genenetwork | Lei Yan | |
| 2012-05-22 | On branch master | root | |
| Your branch is ahead of 'origin/master' by 2 commits. Changes to be committed: (use "git reset HEAD <file>..." to unstage) deleted: web/webqtl/pubmedsearch/PubmedSearch.py deleted: web/webqtl/pubmedsearch/PubmedSearchRe.py deleted: web/webqtl/pubmedsearch/__init__.py deleted: web/webqtl/search/pubmedsearch.py | |||
| 2012-05-22 | Latest version of GN source codes | root | |
| 2012-05-22 | Latest version of GN source codes | root | |
| 2012-05-09 | Update web/javascript/networkGraph.js | GeneNetwork | |
| 2012-05-09 | Update web/javascript/networkGraph.js | GeneNetwork | |
| 2012-05-09 | Update web/javascript/networkGraph.js | GeneNetwork | |
| 2012-05-08 | Add all the source codes into the github. | root | |
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
| aboutsummaryrefslogtreecommitdiff |