genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Collapse)	Author
2021-10-04	Moved REDIS_CONN back into if __name__ == '__main__' since it doesn't need ↵	zsloan
	to be globally accessed anymore (I think I intiially moved it because I was calling it in create_group_data, but that ended up being unnecessary
2021-10-04	Changed the group.py script to replace user e-mails with IDs and to include ↵	zsloan
	id, name, changed_timestamp, and created_timestamp in group details
2021-10-04	scripts: group.py: Modify exit message when displaying updated data	BonfaceKilz

2021-10-04	scripts: group.py: Remove "glom" dependency	BonfaceKilz

2021-10-04	Decode redis response by default	BonfaceKilz

2021-10-04	Modify resource editing script to enable data backups & restoration	BonfaceKilz

2021-10-04	Add script that adds "editors" group to all resources in Redis	BonfaceKilz

2021-10-04	Add script for creating/ updating groups during authorisation	BonfaceKilz

2021-08-16	Add "Description" column to CaseAttribute	BonfaceKilz
	See: eecaad2d
2021-05-13	Fix load_phenotypes to run with GN2 latest	Arthur Centeno

2020-10-29	Replace map on strip with a list comprehension that calls strip()	BonfaceKilz
	* scripts/maintenance/readProbeSetSE_v7.py: In Python3 you can't map string.strip on a list of strings. Instead use a list comprehension and apply strip() on each element of the list. * wqflask/wqflask/marker_regression/plink_mapping.py: Ditto. * wqflask/wqflask/snp_browser/snp_browser.py: Ditto.
2020-08-27	Replace "string.split" & "string.join" with python's inbuilt methods	BonfaceKilz

2020-08-26	Replace tabs with spaces	BonfaceKilz
	* scripts/maintenance/readProbeSetMean_v7.py: Run python-autopep8 on this file.
2020-08-19	Remove extra whitespace(or add it) from comma separated items	BonfaceKilz
	See: <https://docs.python.org/2/library/2to3.html#2to3fixer-urllib>
2020-08-19	Make Python more idiomatic	BonfaceKilz
	Run `2to3-3.8 -f idioms -w .` See: <https://docs.python.org/2/library/2to3.html#2to3fixer-idioms>
2020-08-19	Convert `raw_input` to `input`	BonfaceKilz
	Run `2to3-3.8 -f raw_input -w .` See: <https://docs.python.org/2/library/2to3.html#2to3fixer-raw_input>
2020-08-19	Convert the use of iterator’s next() methods to the next() function	BonfaceKilz
	Run `2to3-3.8 -f next -w .` See: <https://docs.python.org/2/library/2to3.html#2to3fixer-next>
2020-08-19	Change `dict.has_key(key)` to `key in dict`	BonfaceKilz
	Run `2to3-3.8 -f has_key -w .` See: <https://docs.python.org/2/library/2to3.html#2to3fixer-has_key>
2020-08-19	Fix dictionary iteration methods	BonfaceKilz
	Run `2to3-3.8 -f dict -w .` See: <https://docs.python.org/2/library/2to3.html#2to3fixer-dict> and <https://stackoverflow.com/questions/17695456/why-does-python-3-need-dict-items-to-be-wrapped-with-list>
2020-08-19	Wrap `map()` in a `list` call	BonfaceKilz
	Run `2to3-3.8 -f map -w .` See: <https://docs.python.org/2/library/2to3.html#2to3fixer-map>
2020-08-18	Replace "raw_input" with "input"	BonfaceKilz
	* scripts/maintenance/readProbeSetMean_v7.py: Use "input". See https://docs.python.org/3/whatsnew/3.0.html#builtins
2020-08-18	Wrap print statements in parentheses	BonfaceKilz

2020-08-18	Replace DOS style line endings with UNIX style ones	BonfaceKilz
	* scripts/maintenance/readProbeSetSE_v7.py: Run dos2unix against file
2020-08-18	Apply pep8	BonfaceKilz
	* scripts/maintenance/readProbeSetSE_v7.py: Apply pep8 to file to replace tabs with spaces and use correct indentation.
2020-05-05	Add missing columns to db downloaded from AWS	BonfaceKilz

2020-04-28	Added a script for a default runner	Pjotr Prins

2018-04-03	@acenteno added data upload scripts into main repo	Pjotr Prins