| Age | Commit message (Expand) | Author |
|---|---|---|
| 2013-06-20 | Added fubar to the top of notes.txt | Zachary Sloan |
| 2013-06-20 | Added explanation of pushing to github to notes | Zachary Sloan |
| 2013-06-19 | Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/base/data_set.py wqflask/wqflask/views.py Fixed a couple conflicts to merge Lei's code related to the correlation page | Zachary Sloan |
| 2013-06-11 | Put trait info for correlation results page into a dictionary instead...of storing list of GeneralTrait objects Added print statements to track memory usage | Lei Yan |
| 2013-05-08 | Merge branch 'flask' of git://github.com/leiyan/genenetwork into flask | Zachary Sloan |
| 2013-05-08 | Worked on correlation page...Wrote function in dataset.py that gets all the traits in a dataset and their sample values | Lei Yan |
| 2013-04-24 | Began writing code that writes some objects used in LMM to redis...and writes/reads eachitem in the plink_input | Zachary Sloan |
| 2013-04-23 | Created file correlation_plot.py for the correlation scatterplot...Reverted temp_data.py to previous version that doesn't include the "part" input (for chunks) Made change to lmm related to splitting main iterator into chunks Deleted a bunch of unnecessary commented out code from show_trait.py | Zachary Sloan |
| 2013-04-18 | LMM code now reads in gzipped pickled plink snp iterator object | Zachary Sloan |
| 2013-04-18 | input file is now loaded by pickle | Zachary Sloan |
| 2013-03-22 | Added secure_server.py...Updated notes.txt | Zachary Sloan |
| 2013-03-22 | Removed zach_settings.py from git tracking...Changed mysql password as a result of it being up on git before | Zachary Sloan |
| 2013-03-13 | Added some to notes | Zachary Sloan |
| 2013-03-05 | Implemented DataTables; there are now options to download the marker...regression result table in various formats | Zachary Sloan |
| 2013-02-22 | Added some to notes | Zachary Sloan |
| 2013-02-21 | Adding genotypes and new_genotypes (json files) directories to git...so they can be pulled to the new EC2 server | Zachary Sloan |
| 2013-01-31 | Deleted nginx.conf from the other_conf directory not in wqflask | Zachary Sloan |
| 2013-01-25 | Added a bunch of things to notes | Zachary Sloan |
| 2013-01-24 | Added a lot to the notes in the process of setting up on the...new server | Zachary Sloan |
| 2013-01-23 | Added a bunch to notes and created new notes file specifically...related to installing a new instance of GN | Zachary Sloan |
| 2013-01-22 | Added a couple things to notes regarding installing mysql client | Zachary Sloan |
| 2013-01-18 | Renamed CorrelationPage.py to show_corr_results.py...Worked with correlation code; got to the code that begins to do the actual correlations Created a function "get_dataset_and_trait" in the new file "helper_functions.py" because the code initializing the dataset and trait objects was repeated in multiple places | Zachary Sloan |
| 2013-01-11 | Overwrote requirements.txt | Zachary Sloan |
| 2013-01-04 | Correct results are being returned from reaper for the marker regression page | Zachary Sloan |
| 2012-12-05 | Renamed webqtlTrait.py to trait.py...Renamed webqtlTrait class to GeneralTrait Began process of removing fd from show_trait.py Created DatasetGroup object in data_set.py (this may end up becoming its own file later if it becomes big enough) | Zachary Sloan |
| 2012-12-05 | Continued to make changes related to getting rid of cursor/db_conn...and using simple sqlalchemy Got Pheno/MrnaAssay dataset searches working again | Zachary Sloan |
| 2012-11-30 | Got searches working for RANGE and MEAN commands...Created a file where renamed variables will be listed for future reference | Zachary Sloan |
| 2012-11-21 | Changed parser to allow for bother square brackets and parentheses...Changed show_trait.coffee to get the stats table working again Still need to get stats table to work with changed values | Zachary Sloan |
| 2012-11-01 | Began integrating do_search.py's DoSearch object into search_results.py,...with simple searches returning correct results Still need to make results display in the table Sam also did some work with the bootstrap styling | Zachary Sloan |
| 2012-10-25 | Created header and set defaults for the search dropdown options | Zachary Sloan |
| 2012-10-23 | Finished coffeescript that handles the home page dataset selection dropdowns | Zachary Sloan |
| 2012-10-19 | Finished gen_select_dataset.py which generates the json file that defines the...data structure used for the index page select dropdowns | Zachary Sloan |
| 2012-10-09 | Used tidyp to improve/beautify index_page.html | Zachary Sloan |
| 2012-09-25 | Fixed issue with parent strains appearing twice and began replacing variable ... | Zachary Sloan |
| 2012-09-19 | Created correlation page template file, changed the form value name for pears... | Zachary Sloan |
| 2012-09-13 | Worked on improving readData and informativeStrains functions in webqtlFormDa... | Zachary Sloan |
| 2012-09-12 | Worked towards correctly passing form data to correlation page and addressed ... | Zachary Sloan |
| 2012-08-28 | Various changes related to the webqtlCaseData object and the way values/varia... | Zachary Sloan |
| 2012-08-24 | Got the show/hide outliers button working and began fixing the issue where pa... | Zachary Sloan |
| 2012-08-23 | Made some minor changes to trait data and analysis page template | Zachary Sloan |
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| GeneNetwork (2nd generation) |
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