| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-08-28 | Restore collections endpoints | zsloan | |
| Import was removed in commit 7c77ff91f6530aca0865bd13025811f2f93e3541 because it wasn't being used in views.py, but it was providing the collections endpoints albeit indirectly. This commit makes it somewhat explicit that it is a needed module. | |||
| 2024-08-28 | Bug: Compute numeric timestamp for the claims. | Frederick Muriuki Muriithi | |
| 2024-08-28 | Check if case attribute for RRID is a list, to prevent it being added twice ↵ | zsloan | |
| in situations where a sample appears in both the parent/f1 file and the .geno file | |||
| 2024-08-28 | Change default for Mean Expr filter to OR for correlations to avoid ↵ | zsloan | |
| excluding any results when the page first loads | |||
| 2024-08-28 | Remove styling for search field. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-28 | Check metadata exists before setting 'editable' field in get_dataset. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-28 | Revert "Feature/gnqa search history" | Alexander Kabui | |
| 2024-05-29 | Add htmx js api for delete functionality. | Alexander_Kabui | |
| 2024-05-29 | integrate gnqa history delete functionality. | Alexander_Kabui | |
| 2024-05-29 | Handle attributeError when getting error codes. | Alexander_Kabui | |
| 2024-05-28 | BugFix: return correct status code for generic exceptions handler. | Alexander_Kabui | |
| 2024-05-28 | Fix bug: Update DOM correctly when rating error occurs. | Alexander_Kabui | |
| 2024-05-27 | Mark answer and references as safe to render a tags. | Alexander_Kabui | |
| 2024-05-24 | Add UI code for gnqa history search delete functionality. | Alexander_Kabui | |
| 2024-05-23 | Update endpoints and add search history functionality. | Alexander_Kabui | |
| 2024-05-22 | View file code cleanup for gnqa. | Alexander_Kabui | |
| 2024-05-22 | Refactor template code for gnqa search history | Alexander_Kabui | |
| 2024-05-14 | Use correct URL when redirecting user after a new registration. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-05-14 | Bug: fix issue form submission happening twice | Alexander_Kabui | |
| 2024-05-14 | Revert "Disable gnqa functionality." | Munyoki Kilyungi | |
| This reverts commit 01eba6e9b54e45bc937983e33b439a353118de2c. | |||
| 2024-05-14 | Consistently use the same OAuthSession client | Frederick Muriuki Muriithi | |
| 2024-05-14 | Enable client to automatically request a refresh token. | Frederick Muriuki Muriithi | |
| 2024-05-14 | Redirect to index rather than no-longer supported login | Frederick Muriuki Muriithi | |
| Redirect to index of the site rather that the no-longer supported "Password Grant"-using login page. Disable the login route entirely. | |||
| 2024-05-13 | Disable gnqa functionality. | Alexander_Kabui | |
| * to test the functionality use ga.genenetwork.org | |||
| 2024-05-09 | Remove debug statements. | Alexander_Kabui | |
| 2024-05-09 | Improve error messaging for errors in gn fahamu UI. | Alexander_Kabui | |
| 2024-05-07 | Merge pull request #844 from genenetwork/feature/gnqa-ui-revamp | Alexander Kabui | |
| Use HTMX Js api to toggle upvote and downvote functionality. | |||
| 2024-05-07 | Use HTMX Js api to toggle upvote and downvote functionality. | Alexander_Kabui | |
| 2024-05-06 | Use correct link to point to xapian search. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Point the history to the upstream git repository. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Remove unused imports. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Use a dataset's label instead of it's id when fetching auth details. | Munyoki Kilyungi | |
| * gn2/wqflask/views.py (get_dataset): Use a dataset's label as it's identifier. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Pass JWT tokens to gn3. | Munyoki Kilyungi | |
| * gn2/wqflask/edit.py (save): Pass the JWT from gn-auth to GN3. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Revert "Create constructors for encoding and decoding a token." | Munyoki Kilyungi | |
| This reverts commit e7a3bf22da1b63a01343f2cd30cd13c234fe508c. | |||
| 2024-04-30 | Make returning an json object from oauth2_get optional. | Munyoki Kilyungi | |
| * gn2/wqflask/oauth2/client.py (oauth2_get): Add a jsonify_p key word that defaults to False. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Remove unused imports. | Munyoki Kilyungi | |
| * gn2/wqflask/edit.py: Delete subprocess, Paht, Either, Left, Right. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Delete __run__cmd__. | Munyoki Kilyungi | |
| * gn2/wqflask/edit.py (__run_cmd__): Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Remove methods for fetching a dataset's metadata edit history. | Munyoki Kilyungi | |
| * gn2/wqflask/edit.py (__fetch_dataset_git_history__): Delete (view_history): Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Delete function for saving metadata. | Munyoki Kilyungi | |
| * gn2/wqflask/edit.py (save_dataset_metadata): Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Create a JWT to pass in secinfo to a GN3 editing endpoint. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-30 | Create constructors for encoding and decoding a token. | Munyoki Kilyungi | |
| * gn2/tests/unit/wqflask/oauth2/(__init__.py, test_tokens.py): Test cases for jwt token creation. * gn2/wqflask/oauth2/tokens.py (JWTToken): New module for creating jwt tokens. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-25 | Merge pull request #841 from genenetwork/feature/implement-new-qnqa-ui-template | Alexander Kabui | |
| Feature/implement new qnqa UI template | |||
| 2024-04-24 | Bug: use dict object on Response object. | Frederick Muriuki Muriithi | |
| 2024-04-24 | Fetch message for authlib errors. | Frederick Muriuki Muriithi | |
| 2024-04-24 | Send assertion as a string, not bytes. | Frederick Muriuki Muriithi | |
| 2024-04-24 | Use app's logger rather than root logger. | Frederick Muriuki Muriithi | |
| 2024-04-24 | DEBUG: log out request details | Frederick Muriuki Muriithi | |
| There is a failure on CI/CD that is not obvious - the logs should help with debugging the issue. | |||
| 2024-04-24 | Setup logging | Frederick Muriuki Muriithi | |
| Add logging to genenetwork2 | |||
| 2024-04-23 | Create an endpoint for gnqa test template | Alexander_Kabui | |
| 2024-04-23 | Add implementation for new gnqa template. | Alexander_Kabui | |
| * This is a separate interface from gnqa main page for testing. | |||
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