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2024-09-16feat: show log in message for search resultsJohn Nduli
2024-09-16Refactor: refactor url_for for gn docs.Alexander_Kabui
2024-09-16Merge pull request #869 from genenetwork/features/Integrate-editing-doc-filesAlexander Kabui
Integrate gn editor for files.
2024-09-16Refactor: run dlint on html files.Alexander_Kabui
2024-09-16fix: fix url for gn-docs glossary.Alexander_Kabui
2024-09-13Use gn_docs blueprint for doc files.Alexander_Kabui
2024-09-13Define new blueprint for all gn_docs.Alexander_Kabui
2024-09-13Use urlencode for query strings.Alexander_Kabui
2024-09-13Update data if new changes are made.Alexander_Kabui
2024-09-13refactor: urlencode query string.Alexander_Kabui
2024-09-13Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵Alexander_Kabui
feature/xapian-to-llm-text-transformer
2024-09-13Move the clean xapian query function to gn2 helper functions.Alexander_Kabui
2024-09-13Use if statement for clarity.Alexander_Kabui
2024-09-12Add a generic gn_docs template.Alexander_Kabui
2024-09-12Use generic template for similar templates.Alexander_Kabui
2024-09-12Autopep8 fixes.Alexander_Kabui
2024-09-12Render markdown from genenenetwork:gn-docs.Alexander_Kabui
2024-09-12Add util functions for fetching and rendering markdown as html.Alexander_Kabui
2024-09-12Minor typo fix.Alexander_Kabui
2024-09-12Fetch markdown for rendering form gn-docs.Alexander_Kabui
2024-09-12Integrate gn editor for files.Alexander_Kabui
2024-09-12fix: stop extending gnqa_answer.htmlJohn Nduli
gnqa_answer.html is used by htmx to return a post result. I revert my change and include this in `gnqa.html` instead, to load results from a GET request.
2024-09-12feat: add rough implementation for xapian query cleanerJohn Nduli
2024-09-12fix: change request for search to getJohn Nduli
2024-09-12fix: gnqa_answer but fix for missing htmlJohn Nduli
2024-09-12feat: implement text transformer for xapian searches.Alexander_Kabui
2024-09-12refactor: Use get for all request to gn3 search endpoint.Alexander_Kabui
2024-09-12refactor: render gnqa homepage if no query for get request.Alexander_Kabui
2024-09-12Fix: minor typo fix.Alexander_Kabui
2024-09-11JOSS logo is defunctFrederick Muriuki Muriithi
Taken from commit https://github.com/genenetwork/genenetwork2/commit/20256ebae8c10fe9caae4599d1678936581e8f8e by Pjotr Prins. I did not want to deal with the merge conflicts that have arisen due to the differences in time since the original commit was made and when I finally got to merging it. It was just easier to copy the change.
2024-09-11Introduce recent D3Pjotr Prins
2024-09-11Bump D3 to version 7 for pair scanPjotr Prins
2024-09-11Fix d3panels load path to use GuixPjotr Prins
2024-09-11Remove JS d3panels package - we are moving that to guix-bioinformaticsPjotr Prins
2024-09-11Avoid loading fontawesome twice (it is in base) and change button class for ↵Pjotr Prins
purescript browser
2024-09-11feat: async js loading for fahamu resultsJohn Nduli
2024-09-11feat: ai_search result loaded by javascriptJohn Nduli
2024-09-11feat: ai search uses accordion to fold_outJohn Nduli
2024-09-11refactor: align search llm tooltip to be verticalJohn Nduli
2024-09-11fix: add flag that enables/disables search UIJohn Nduli
2024-09-11feat: add ai search box to xapian results pageJohn Nduli
2024-09-11BugFix: Avoid string interpolation for building URLsFrederick Muriuki Muriithi
The string interpolation previously used was leading to a URL of the form `http://localhost:9080api/rqtl/compute` rather than `http://localhost:9080/api/rqtl/compute`.
2024-09-11Fixup Use white-space pre-line to show newlines for answer.Alexander_Kabui
2024-09-10Merge changesAlexander_Kabui
2024-09-10Implement client side pagination for history page.Alexander_Kabui
2024-09-10Minor pydint fixes.Alexander_Kabui
2024-09-10Add debug logging for GEMMA mapping commandsFrederick Muriuki Muriithi
2024-09-10Use white-space pre-line to show newlines for answer.Alexander_Kabui
2024-09-06Fail noisily to help with troubleshooting issues.Frederick Muriuki Muriithi
2024-09-06Use query string for Gnqa Search endpoint.Alexander_Kabui